VT-NAMIC Workflow Slicer-related issues - Revision history

Fedorov at 23:43, 9 October 2009

2009-10-09T23:43:23Z

Fedorov at 04:08, 9 October 2009

2009-10-09T04:08:09Z

Fedorov at 21:52, 8 October 2009

2009-10-08T21:52:33Z

Fedorov at 19:48, 8 October 2009

2009-10-08T19:48:37Z

Fedorov at 19:35, 8 October 2009

2009-10-08T19:35:03Z

Fedorov: Created page with '* Transforms loaded as .mat cannot be saved as .mat. Is there a loss of precision in transform shuffling? * EM segmenter does not save some fields in the MRML * extensions are no…'

2009-10-08T19:25:23Z

Created page with '* Transforms loaded as .mat cannot be saved as .mat. Is there a loss of precision in transform shuffling? * EM segmenter does not save some fields in the MRML * extensions are no…'

New page

* Transforms loaded as .mat cannot be saved as .mat. Is there a loss of precision in transform shuffling?
* EM segmenter does not save some fields in the MRML
* extensions are not in Slicer path
* BRAINSFit version as of Oct 8 is broken -- need to revert to 301 that was used by AF earlier

@@ Line 6: / Line 6: @@
 * See the directions matrix feature available in Slicer2 missing
 * sometime when the transform is modified, it shows up as "Modified" in Slicer save dialog, but the checkbox is not set
 Slicer-related, but not Slicer issues:

← Older revision		Revision as of 04:08, 9 October 2009
Line 6:		Line 6:
	* See the directions matrix feature available in Slicer2 missing		* See the directions matrix feature available in Slicer2 missing
	* sometime when the transform is modified, it shows up as "Modified" in Slicer save dialog, but the checkbox is not set		* sometime when the transform is modified, it shows up as "Modified" in Slicer save dialog, but the checkbox is not set
		+
		+	Slicer-related, but not Slicer issues:
		+
		+	* N4ITK with the threaded bspline filter cannot handle tilted FOV volumes
		+	* confirm N4ITK doesn't work with OrientedImage class
		+	* BRAINSFit extension is totally broken as of Oct 9 svn
		+	* investigate the cause of BRAINSFit failing in BSPline registration when mask is used and FOV tilted

← Older revision		Revision as of 21:52, 8 October 2009
Line 5:		Line 5:
	* Slicer slider has inconsistent response to the clicks to the side of slider -- ignores clicks, then jumps -- very hard to do small adjustments		* Slicer slider has inconsistent response to the clicks to the side of slider -- ignores clicks, then jumps -- very hard to do small adjustments
	* See the directions matrix feature available in Slicer2 missing		* See the directions matrix feature available in Slicer2 missing
		+	* sometime when the transform is modified, it shows up as "Modified" in Slicer save dialog, but the checkbox is not set

← Older revision		Revision as of 19:48, 8 October 2009
Line 4:		Line 4:
	* BRAINSFit version as of Oct 8 is broken -- need to revert to 301 that was used by AF earlier		* BRAINSFit version as of Oct 8 is broken -- need to revert to 301 that was used by AF earlier
	* Slicer slider has inconsistent response to the clicks to the side of slider -- ignores clicks, then jumps -- very hard to do small adjustments		* Slicer slider has inconsistent response to the clicks to the side of slider -- ignores clicks, then jumps -- very hard to do small adjustments
		+	* See the directions matrix feature available in Slicer2 missing

← Older revision		Revision as of 19:35, 8 October 2009
Line 3:		Line 3:
	* extensions are not in Slicer path		* extensions are not in Slicer path
	* BRAINSFit version as of Oct 8 is broken -- need to revert to 301 that was used by AF earlier		* BRAINSFit version as of Oct 8 is broken -- need to revert to 301 that was used by AF earlier
		+	* Slicer slider has inconsistent response to the clicks to the side of slider -- ignores clicks, then jumps -- very hard to do small adjustments