ARCTIC Tutorial

ARCTIC (Automatic Regional Cortical ThIChness) Slicer3 Tutorial

Overview

Following this tutorial, you will be able to perform an individual analysis of regional cortical thickness. You will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes.

Softwares

• Slicer3 http://www.slicer.org/pages/Downloads

• BatchMake‏ http://www.batchmake.org/batchmake/resources/software.html

Tutorial materials

• BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)‏ http://www.nitrc.org/projects/arctic/

• Tutorial dataset(ARCTIC_Tutorial_example_1.0)‏ http://www.nitrc.org/projects/arctic/

• External modules (ARCTIC_Executables_1.0)‏ http://www.nitrc.org/projects/arctic/

• Pediatic atlas (UNC_Pediatric_Brain_Atlas)‏ http://www.insight-journal.org/midas/item/view/2277

People

Cedric Mathieu Clement Vachet Martin Styner