Difference between revisions of "User:Inorton"

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Isaiah Norton, Golby Lab, Department of Neurosurgery
 
  
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contact: [mailto:inorton@bwhd-tharvardd0tedu inorton @bwh d-t harvard d0t edu]
 
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===Slicer Notes===
 
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Things that aren't fleshed-out enough to go into Mantis, or if I can't fully reproduce yet, can't share the data right now, etc..
 
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==Bugs==
 
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*Can't load high-res MEMPRAGE MRI from MGH for AG case in Slicer3. workaround: loaded fine in slicer2, then saved as nrrd.
 
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==Feature Wishes==
 
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*Better transform handling in the registration code: should sort out any hierarchies for cross-registration (ie, want to register to something that is already inside another transform)
 
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*Put models inside appropriate transform after generation
 
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*Editing volume inside of transform - don't want to have to move volumes out every time to change labelmaps in a complex scene.
 
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*Tract (hyperstreamline) intersection with MR planes (highlighted with color change, ring, etc.)
 
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*Slice intersections in 3D viewer (helps with depth perception).
 
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==Thoughts==
 
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==How-to-do-this==
 
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*[LoadBrainPointsIntoSlicer]
 
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===Other Notes===
 
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[[Slicer3BuildWindows7|Building Slicer3 on Windows 7]]
 
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[[Slicer3WrapITKPython|Slicer3 with WrapITK for Python ITK wrapping]]
 
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[[Tidbits]]
 
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[[UseIntelMKLwithMatlabForFasterSPM]]
 
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[[ExternalConnectionsToSPL]]
 
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[[LinuxScreenCaptureMovieNotes]]
 
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[[CTPhantomSegmentation]]
 
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[[LoadAnalyzeIntoBrainLab]]
 
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[[LoadfMRIIntoInstaTrak]]
 
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[[ImageConversionUtilities]]
 

Latest revision as of 20:17, 13 July 2018