Difference between revisions of "Slicer3:Diffusion Editor"
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== Goals / What it can (in a while)== | == Goals / What it can (in a while)== | ||
− | # Load a DWI dataset. If you load any other type of dataset the DWI Gradient Editor will be disabled. | + | # '''Load a DWI dataset'''. If you load any other type of dataset the DWI Gradient Editor will be disabled. |
− | # Choose the Measurement Frame. | + | #''' Choose the Measurement Frame'''. |
− | ## Negative: Select the columns you want to negative. | + | ## '''Negative''': Select the columns you want to negative. |
− | ## Swap: Select two columns you want to swap. | + | ## '''Swap''': Select two columns you want to swap. |
− | ## Rotate: Select one column you want to rotate by an angle you can | + | ## '''Rotate''': Select one column you want to rotate by an angle you can |
### choose from a given set of values. | ### choose from a given set of values. | ||
### set yourself. | ### set yourself. | ||
− | # Define | + | # '''Define Gradients'''. |
## If the DICOM header has the information about the gradients, the editor will put them in the text field. | ## If the DICOM header has the information about the gradients, the editor will put them in the text field. | ||
## If there is no information about the gradients, the GE gradients will be displayed by default. | ## If there is no information about the gradients, the GE gradients will be displayed by default. | ||
## You can copy/paste your own gradients in the text field. | ## You can copy/paste your own gradients in the text field. | ||
#Run the test. To see if the chosen parameters are reasonable, you can run a test that computes the Tractography Seeding. | #Run the test. To see if the chosen parameters are reasonable, you can run a test that computes the Tractography Seeding. | ||
− | #Save the parameters as a NHRD File. | + | #'''Save''' the parameters as a NHRD File. |
− | #Load an existing NHRD File and run the test. | + | #'''Load''' an existing NHRD File and run the test. |
== How to use the editor == | == How to use the editor == |
Revision as of 21:06, 5 December 2007
Home < Slicer3:Diffusion EditorInterface
This screen shots show how the Interface will look like.
Goals / What it can (in a while)
- Load a DWI dataset. If you load any other type of dataset the DWI Gradient Editor will be disabled.
- Choose the Measurement Frame.
- Negative: Select the columns you want to negative.
- Swap: Select two columns you want to swap.
- Rotate: Select one column you want to rotate by an angle you can
- choose from a given set of values.
- set yourself.
- Define Gradients.
- If the DICOM header has the information about the gradients, the editor will put them in the text field.
- If there is no information about the gradients, the GE gradients will be displayed by default.
- You can copy/paste your own gradients in the text field.
- Run the test. To see if the chosen parameters are reasonable, you can run a test that computes the Tractography Seeding.
- Save the parameters as a NHRD File.
- Load an existing NHRD File and run the test.