Instructions to Build SPLOT
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Create directory "splot-build"
- Make this directory anywhere you want
- This is the place all splot stuff and its dependent libs will sit
Build ACE
- Download ACE source code, e.g. ACE-5.5.tar.gz, from this site: http://download.dre.vanderbilt.edu/
- Move the compressed source code (e.g. ACE-5.5.tar.gz) to the directory "splot-build"
- Unzip the source code and you will have this directory: ACE_wrappers
gunzip ACE-5.5.tar.gz tar xvf ACE-5.5.tar
- Set environment variable: ACE_ROOT. For instance, in .bash_profile, add
ACE_ROOT=/home/hliu/projects/splot-build/ACE_wrappers export ACE_ROOT
- Add ACE lib to environment variable: LD_LIBRARY_PATH. For instance, in .bash_profile, add
LD_LIBRARY_PATH=$ACE_ROOT/lib:$LD_LIBRARY_PATH export LD_LIBRARY_PATH
- Create a configuration file, config.h, in $ACE_ROOT/ace. Config.h will contain only the following line:
#include "ace/config-linux.h"
This file includes the appropriate platform/compiler-specific header configurations from the ACE source directory.
- Create a build configuration file, platform_macros.GNU, in $ACE_ROOT/include/makeinclude. Platform_macros.GNU will contain only the following line:
include $(ACE_ROOT)/include/makeinclude/platform_linux.GNU
This file contains the compiler and Makefile directives that are platform/compiler-specific.
- Run "make" in the ACE_ROOT directory
The compiling failed in building $ACE_ROOT/ACEXML/examples/SAXPrint. But the ACE libraries are already built in $ACE_ROOT/lib.
Build xerces
- Download "xerces-c-src_2_7_0.tar.gz" from: http://archive.apache.org/dist/xml/xerces-c/source/ into the directory "splot-build"
- Unzip the source code and you will have this directory: xerces-c-src_2_7_0
gunzip xerces-c-src_2_7_0.tar.gz tar xvf xerces-c-src_2_7_0.tar
- Set environmental variable: XERCESCROOT. For instance, in .bash_profile, add:
XERCESCROOT=/home/liu/projects/splot-build/xerces-c-src_2_7_0 export XERCESCROOT
- Run autoconf
cd $XERCESCROOT/src/xercesc autoconf
- In the same directory,
./configrue make
- You will see libraries built in $XERCESCROOT/lib
Build scons
- Download scons from http://www.scons.org/download.php and unzip it into the directory "splot-build"
- Change directory to the scons root directory, e.g. scons-0.96.1
cd /home/surg/projects/splot-build/scons-0.96.1
- Intall scons. For instance, run
python setup.py install --prefix=/home/surg/projects/splot-build/scons-0.96.1
- Intall scons libs. For instance, run
python setup.py install --standard-lib --prefix=/home/surg/projects/splot-build/scons-0.96.1
- Set PATH for /home/surg/projects/splot-build/scons-0.96.1/bin
Build opentracker
- In "splot-build,", download opentracker 2.0 from
svn co --username otreader https://svn.icg.tu-graz.ac.at/svn/opentracker/trunk opentracker
Press "t" to temporarily accept the certificate. Input OPEN4read when prompted for password.
- Download ICGBuilder from https://share.spl.harvard.edu/xythoswfs/webui/users/hliu/JHU and unzip it into "splot-build"
- Make a symlink in the opentracker root directory to 'ICGBuilder'
ln -s ../ICGBuilder ICGBuilder
- Set the environment variables XERCESROOT and ACEROOT. For instance, in .bash_profile, add
XERCESROOT=/home/surg/projects/splot-build/xerces-c-src_2_7_0 export XERCESROOT ACEROOT=/home/surg/projects/splot-build/ACE_wrappers export ACEROOT
- Add xerces library path to LD_LIBRARY_PATH to build the middleware executable (we don't really need this), e.g.
LD_LIBRARY_PATH=$XERCESROOT/lib:$LD_LIBRARY_PATH
- Run scons in the OpenTracker root directory
scons
Build newmat
- Download newmat (e.g. newmat11.tar.gz) from http://www.robertnz.net/download.html
- Make a directory newmat in "splot-build" and unzip the code into "newmat"
- Compile newmat by running
make -f nm_gnu.mak
Build CMake
Assume Slicer3 has been built, set PATH for CMake bin.
Build SPLOT
- Check out SPLOT code into "splot-build" from
svn co http://www.na-mic.org:8000/svn/Sign/SPLOT/trunk SPLOT
- Configure the build by running this command in SPLOT root directory
ccmake .
ACE: path + libACE.so; ACE_DIR: path to ACE_wrappers; OPENTRACKER: path + libopentracker.so; OT_INC: path to OpenTracker.h; XERCES: path + libxerces-c.so
- Modify CMakeLists.txt to compile: add splot-build/opentracker/include to INCLUDE_DIRECTORIES
- Compile
make