BRAINSFit to simpleITK

Goal: We want to transfer the functionality of BSpline prostate registration in Slicer 3.6 to SimpleITK. Registration is applied to align preprocedural and intraoperational MR T2 image volumes. We are using masks the prostate for both image data sets.

Parameters we are using to call BRAINSFit in Slicer 3.6 can be found here.

Sample data can be found can be found here.