Difference between revisions of "2008 Winter Project Week Tractography Meeting Notes"
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== ROI definitions and impact on different methods == | == ROI definitions and impact on different methods == | ||
| − | * Force all methods to use the same ROIs? | + | * Force all methods to use the same ROIs? |
| + | - For streamline methods larger ROIs than the tract itself good | ||
Methods: | Methods: | ||
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* Streamline Fiberviewer (Casey) | * Streamline Fiberviewer (Casey) | ||
* Stochastic Slicer3 (Tri) | * Stochastic Slicer3 (Tri) | ||
| − | * Shortest path | + | * Shortest path, volumetric (John) |
| − | * Shortest path, | + | * Shortest path, volumetri (Tom) |
==Review and define metrics to compare results, which methods to compare?== | ==Review and define metrics to compare results, which methods to compare?== | ||
| Line 17: | Line 18: | ||
* 12 different tracts | * 12 different tracts | ||
| − | * Tracts voxelized | + | * Tracts voxelized -> volumetric result from tracts |
* Missing parts of a tract, how should be penalized? | * Missing parts of a tract, how should be penalized? | ||
* Statistics along the tracts, should we sum along the tract to get one measure? | * Statistics along the tracts, should we sum along the tract to get one measure? | ||
Revision as of 17:16, 9 January 2008
Home < 2008 Winter Project Week Tractography Meeting NotesContents
Data quality, NAMIC DTI pipeline
- Issues?
ROI definitions and impact on different methods
- Force all methods to use the same ROIs?
- For streamline methods larger ROIs than the tract itself good
Methods:
- Streamline Slicer2 (Sonia)
- Streamline Fiberviewer (Casey)
- Stochastic Slicer3 (Tri)
- Shortest path, volumetric (John)
- Shortest path, volumetri (Tom)
Review and define metrics to compare results, which methods to compare?
Current metrics: tensor invariants (FA, trace, mode, norm), volume, length.
- 12 different tracts
- Tracts voxelized -> volumetric result from tracts
- Missing parts of a tract, how should be penalized?
- Statistics along the tracts, should we sum along the tract to get one measure?
- Distributions across the tract
- Atlas (Casey)
