Difference between revisions of "2010 Winter Project Week TubularTreeSeg"
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Revision as of 16:18, 8 January 2010
Home < 2010 Winter Project Week TubularTreeSeg
Snapshot of Tubular Surface Segmentation framework as a Slicer module, and obtained result
Key Investigators
- Vandana Mohan (Georgia Tech)
- Marek Kubicki (BWH)
Objective
Implement a Slicer module for the Tubular Tree segmentation framework of Mohan et al.
Approach, Plan
Implement as a command-line module via integration of current MATLAB implementation.
Progress
- The algorithm is available in MATLAB with parts of the framework as C code (via mex).
- During winter project week 2010: Framework integrated into Slicer as MATLAB module. Tested for CB segmentation. (See above image for snapshot of module view and result from Slicer.)
- Next steps: Enable branching detection in framework, and test on vessel segmentation.
References
"Tubular Surface Segmentation for extracting anatomical structures from medical imagery"; Vandana Mohan, Ganesh Sundaramoorthi and Allen Tannenbaum; IEEE Transactions in Medical Imaging (in review)
