Difference between revisions of "2010 Winter Project Week WM ATLAS"
From NAMIC Wiki
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<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | + | Implement tract-based morphometry pipeline in 3D Slicer, including atlas-based WM (white matter) segmentation and whole-brain WM coordinate system generation. Investigate integration of FMRI+DTI into atlas pipeline, for neurosurgical planning applications. | |
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<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | + | The original pipeline consists of (over a group): | |
| + | --preprocessing | ||
| + | ---- DTI and FA image calculation, congealing registration of FA images, whole-brain tract seeding, application of registration to tractography, | ||
</div> | </div> | ||
Revision as of 17:13, 8 December 2009
Home < 2010 Winter Project Week WM ATLAS
Automatically segmented fiber tracts.
Example whole-brain tract cluster mean fibers.
Key Investigators
- Lauren O'Donnell (Instructor, Harvard Medical School (BWH))
- Carl-Fredrik Westin (Professor, Harvard Medical School (BWH) )
- William Wells (Professor, Harvard Medical School (BWH) )
- Alexandra J Golby (Professor of Neurosurgery, Harvard Medical School (BWH) )
Objective
Implement tract-based morphometry pipeline in 3D Slicer, including atlas-based WM (white matter) segmentation and whole-brain WM coordinate system generation. Investigate integration of FMRI+DTI into atlas pipeline, for neurosurgical planning applications.
Approach, Plan
The original pipeline consists of (over a group): --preprocessing
DTI and FA image calculation, congealing registration of FA images, whole-brain tract seeding, application of registration to tractography,
