Difference between revisions of "2011 Summer Project Week Customizing EMSegmenter pipelines for brain lesions"

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Image:EMS_LesionExp_Segmentation.png | Segmentation
 
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Image:EMS LesionExp T1.png | T1 scan
 
Image:EMS LesionExp T1.png | T1 scan

Revision as of 14:06, 24 June 2011

Home < 2011 Summer Project Week Customizing EMSegmenter pipelines for brain lesions

Customizing EMSegmenter pipelines for brain lesions

Key Investigators

  • University of Pennsylvania: Dominique Belhachemi
  • University of Pennsylvania: Kilian Pohl
  • Brigham and Women's Hospital: Alex Zaitsev


Objective

The goal is to segment white matter lesions based on T1 and FLAIR brain scans.

Approach, Plan

We want to use the EMSegmenter module for this project. The plan is to create a two channel pipeline which includes pre-processing (e.g. registration) and applying the EM algorithm to perform the segmentation.

Progress


References

  • Segmentation

  • FLAIR scan

  • T1 scan

http://www.slicer.org/slicerWiki/index.php/EMSegmenter-Tasks


Delivery Mechanism

This work will be delivered to the NAMIC Kit as part of the EMSegmenter module.

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