Difference between revisions of "2013 Summer Project Week:LabelMapStatistics"

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Image:PW-MIT2013.png|[[2013_Summer_Project_Week#Projects|Projects List]]
 
Image:PW-MIT2013.png|[[2013_Summer_Project_Week#Projects|Projects List]]
 
Image:Slicer4-DiceComputation-GUI.png|DiceComputation GUI
 
Image:Slicer4-DiceComputation-GUI.png|DiceComputation GUI
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Image:DiceComputation-newFeatures.png|New features
 
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<h3>Progress</h3>
 
<h3>Progress</h3>
 
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* Implemented label map cropping feature
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* Implemented exportation of dice and statistics as csv
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* Discussed with Csaba
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** Merging modules will be difficult. Lot of their modules use plastimatch.
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** Plan to publish plastimatch as non-module extension
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** Plan to create CMake auto-download dependency
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** When plastimatch will be available in auto-download, try to switch dice algorithm to plastimatch
 
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==Delivery Mechanism==
 
==Delivery Mechanism==
  
This work will be delivered to the NA-MIC Kit as a (please select the appropriate options by noting YES against them below)
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This work will be delivered to the NA-MIC Kit as a Slicer extension. Repository is here [https://github.com/lchauvin/DiceComputation]
 
 
#ITK Module
 
#Slicer Module
 
##Built-in
 
##Extension -- commandline
 
##Extension -- loadable
 
#Other (Please specify)
 
  
 
==References==
 
==References==

Latest revision as of 14:06, 21 June 2013

Home < 2013 Summer Project Week:LabelMapStatistics

Key Investigators

  • Queen's: Csaba Pinter
  • BWH: Laurent Chauvin

Objective

  • Add more label map statistics computation to Dice module

Approach, Plan

  • Discuss with Csaba to regroup several modules computation statistics on label maps
  • New module will allow to compute Dice coefficient, distance map, etc... for several label maps and display results for easy reading

Progress

  • Implemented label map cropping feature
  • Implemented exportation of dice and statistics as csv
  • Discussed with Csaba
    • Merging modules will be difficult. Lot of their modules use plastimatch.
    • Plan to publish plastimatch as non-module extension
    • Plan to create CMake auto-download dependency
    • When plastimatch will be available in auto-download, try to switch dice algorithm to plastimatch

Delivery Mechanism

This work will be delivered to the NA-MIC Kit as a Slicer extension. Repository is here [1]

References