2014 Project Week:TBISegmentation

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Active 4D.png

Key Investigators

  • GE: Marcel Prastawa
  • Utah: Bo Wang, Guido Gerig
  • UCLA: Andrei Irimia, Jack Van Horn

Project Description


  • Developing a pipeline using Slicer modules for the input of the TBI segmentation algorithm.
  • We intend to spend some time on user study about human experts manual segmentation.
  • Testing the algorithm and getting feedback from USC team.

Approach, Plan

  • Testing to use Slicer registration module for intra and inter time points coregistration
  • Testing to use Slicer registration module for initial atlas alignment
  • Testing to use Slicer skull stripping module to generate initial brain mask
  • Conducting user studies about human experts manual segmentation