Difference between revisions of "2016 Summer Project Week/MeVisLab SEG Colors"
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Hans.meine (talk | contribs) (document progress) |
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==Key Investigators== | ==Key Investigators== | ||
* Hans Meine | * Hans Meine | ||
| − | * Andrey Fedorov | + | * Andrey Fedorov |
==Project Description== | ==Project Description== | ||
| Line 21: | Line 21: | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | * | + | * A new DICOM tree browser has been implemented. (The existing one had strange problems with showing all SegmentSequence subtags.) |
| + | * The DICOM import configuration (DirectDicomImport module) has been extended to properly import multi-segment files. | ||
| + | * It has been identified [http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_A.51.3.html which data is necessary and interesting], and where it is stored: | ||
| + | ** ClinicalTrial{SeriesID,TimePointID,CoordinatingCenterName} | ||
| + | ** [http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.8.20.2.html SegmentationType, SegmentationFractionalType] (binary / fractional probability / fractional occupancy) | ||
| + | ** [http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.8.20.4.html#table_C.8.20-4 per-segment information] | ||
| + | *** LabelID, SegmentDescription, color | ||
| + | *** algorithm type (automatic, semiautomatic, manual) | ||
| + | *** SegmentedPropertyCategoryCode, SegmentedPropertyTypeCode, SegmentedPropertyTypeModifierCode sequences | ||
| + | *** tracking ID / UIDs | ||
</div> | </div> | ||
</div> | </div> | ||
Revision as of 16:09, 24 June 2016
Home < 2016 Summer Project Week < MeVisLab SEG Colors
Key Investigators
- Hans Meine
- Andrey Fedorov
Project Description
Objective
- Make it possible to assign SEG colors in MeVisLab.
- Make it possible to read / use existing SEG colors in MeVisLab.
Approach, Plan
- Implement modules for accessing / modifying the DICOM tree for the two objectives.
Progress
- A new DICOM tree browser has been implemented. (The existing one had strange problems with showing all SegmentSequence subtags.)
- The DICOM import configuration (DirectDicomImport module) has been extended to properly import multi-segment files.
- It has been identified which data is necessary and interesting, and where it is stored:
- ClinicalTrial{SeriesID,TimePointID,CoordinatingCenterName}
- SegmentationType, SegmentationFractionalType (binary / fractional probability / fractional occupancy)
- per-segment information
- LabelID, SegmentDescription, color
- algorithm type (automatic, semiautomatic, manual)
- SegmentedPropertyCategoryCode, SegmentedPropertyTypeCode, SegmentedPropertyTypeModifierCode sequences
- tracking ID / UIDs
