Difference between revisions of "AHM 2010 Tutorial Contest - Hammer Registration"

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== Centerline Extraction of Coronary Arteries in 3D Slicer using VMTK based Tools ==
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__NOTOC__
 
<gallery>
 
<gallery>
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File:VMTKCenterlines Tutorial first slide.png|
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Image:HammerAttribute.jpg|Components of Hammer Attribute Vectors.
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Image:Vmtkcloseupvoronoicenterlinewithreference.png|Lumen Segmentation, Voronoi diagram and centerline of a coronary artery.
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Image:HammerSimilarity.png|Similarity map (middle column) computed on moving image (right) for the selected point on the fixed image (left, cross). Point indicated by a cross on the middle and right column is the point on the moving image that is the most similar to the picked point on the fixed image.
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Image:Vmtkafterevolutionanim.gif|An over-layed label map showing the segmentation in 2D.
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Image: namic.png|The output deformation filed by HAMMER
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Image: hammer.png|HAMMER in Slicer3
 
</gallery>
 
</gallery>
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==Key Investigators==
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* UNC: Guorong Wu, Dinggang Shen
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* GE : Xiaodong Tao, Jim Miller
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<div style="margin: 20px;">
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<div style="width: 27%; float: left; padding-right: 3%;">
  
 
=== Objective ===
 
=== Objective ===
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=== Downloads ===
 
=== Downloads ===
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# [http://www.na-mic.org/Wiki/images/4/40/TutorialVMTKCoronariesCenterlinesMRI_Winter2010AHM.pdf Tutorial Slides]
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# [http://www.na-mic.org/Wiki/index.php/File:HAMMER_Tutorial_V3.pdf‎ Tutorial Slides (AHM2010)]
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# [http://www.na-mic.org/Wiki/images/a/aa/TutorialVMTKCoronariesCenterlinesMRI_Data_Winter2010AHM.zip Tutorial Data]
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# [http://www.loni.ucla.edu/Atlases/Atlas_Detail.jsp?atlas_id=12 Tutorial Data 1 (LONI)]
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# [http://www.nirep.org/ Tutorial Data 2 (NIREP)]
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# [http://www.na-mic.org/Wiki/index.php/File:TutorialData_HAMMER.zip Tutorial Data 3 (OASIS)]

Latest revision as of 14:06, 6 January 2010

Home < AHM 2010 Tutorial Contest - Hammer Registration

  • Components of Hammer Attribute Vectors.

  • Similarity map (middle column) computed on moving image (right) for the selected point on the fixed image (left, cross). Point indicated by a cross on the middle and right column is the point on the moving image that is the most similar to the picked point on the fixed image.

  • The output deformation filed by HAMMER

  • HAMMER in Slicer3

Key Investigators

  • UNC: Guorong Wu, Dinggang Shen
  • GE : Xiaodong Tao, Jim Miller

Objective

Present our namic project on HAMMER registration algorithm and introduce how to use HAMMER in Slicer3.

Downloads

  1. Tutorial Slides (AHM2010)
  2. Tutorial Data 1 (LONI)
  3. Tutorial Data 2 (NIREP)
  4. Tutorial Data 3 (OASIS)
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