Difference between revisions of "CTSC:ARRA.052510"

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(Created page with 'Back to CTSC:ARRA supplement <br> '''Agenda''' * XNAT-mi2b2 integration * mi2b2 installation update * IRB update * medical image collections at each institution * granulari…')
 
 
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* mi2b2 installation update
 
* mi2b2 installation update
 
* IRB update
 
* IRB update
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* medical image collections at each institution
 
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* granularity of image data transfer
 
  
 
== Harvard Catalyst Medical Informatics group Meeting Minutes May 25, 2010 ==
 
== Harvard Catalyst Medical Informatics group Meeting Minutes May 25, 2010 ==
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* Valerie Humblet
 
* Valerie Humblet
 
* Wendy Plesniack
 
* Wendy Plesniack
−
* Bill Tellier
+
* Paul Lamonica
 
* Alex Zeitsev
 
* Alex Zeitsev
 
* Charles McGow
 
* Charles McGow
 
* Ron Kikinis
 
* Ron Kikinis
 +
* Darren Sack
 
* Mark Anderson (phone)
 
* Mark Anderson (phone)
−
* Darren Sachs
+
* Jesse Wei (phone)
 
* Dan Marcus (phone)
 
* Dan Marcus (phone)
 
<br>
 
<br>
−
* Jesse Wei
 
  
 
== Meeting Minutes ==
 
== Meeting Minutes ==
 
<br>
 
<br>
 
* '''XNAT-mi2b2 integration'''
 
* '''XNAT-mi2b2 integration'''
−
Chris (other i2b2 team), Steve, Yong, Shawn, Dan, Tim and John from Wash U- 9:30 AM pre-call
+
Dan Marcus proposed a subgroup from this team and his team meet by phone the hour prior to next week's meeting to define the specific XNAT developments needed to support the mi2b2 project.  Then that group will present their suggestions to this meeting to get further input. Dan suggested that Chris and his other i2b2 team members, Steve, Yong, Shawn, Dan, Tim and John from Wash U gather for the 9:30 AM pre-meeting call.  Valerie will help coordinate.
−
Optical imaging is custom for each
+
*'''mi2b2 STAR-D installation site update:'''  
−
*'''mi2b2 STAR-D installation site update:'''  
+
**(BIDMC) Jesse and Chris's meeting with BIDMC Radiology IT went reasonably smoothly.  They had no specific problems with it, but earliest date that they will be ready is July.
−
**(CHB) Paul and Chris finished the mi2b2 STAR-D installation on a Windows XP platform and it now logs into the Children's PACS.  Paul wrote up the installation instructions, Chris added screenshots and will add it to [[Mi2b2_(i2b2_instance_with_the_STAR-D_software)_specifications_and_installation_instructions | this wiki page]].   
 
−
**(BIDMC) Jesse is meeting this afternoon with Chris H and BIDMC Radiology IT.   
 
 
**(BWH) Chris will make an appointment with Kathy to do the BWH install as soon as possible.
 
**(BWH) Chris will make an appointment with Kathy to do the BWH install as soon as possible.
−
**(MGH) Darren Sachs schedule time with Chris is Friday is week for the installation.   
+
**(MGH) Darren Sachs is trying to schedule time with Chris this Friday (needed to be rescheduled) for the installation.   
 
<br>
 
<br>
−
*'''IRB update:''' Shawn found out that at BIDMC, the i2b2 IRB protocol held by Griffin Webber was just recently approved and is extremely complex.  Thus, Griffin's opinion is that it is not the best choice for BIDMC to add this as an amendment.  Thus, there will need to be a new IRB protocol submitted. Jesse will be the PI for the protocol and will add Griffin, Chris, Shawn to BIDMC.  Bill and Paul still are still working on their CITI training.  Charles confirmed that they can then be added to the CHB IRB, held by Dan Nigrin.
+
*'''IRB update:''' Jesse will wait to submit his IRB until his server is up and running.  Bill and Paul finished their CITI training.  Charles confirmed that Dan Nigrin has the info to add them and Chris to the CHB IRB.  
−
<br>
 
−
*'''Knowledge discovery of number of separate PACS and medical image collections at each institution:'''  BWH has most comprehensive medical image collection within the management of the Department of Radiology's IT team.  It includes cardiac ultrasound, ob/gyn ultrasound, GI, nuclear medicine and more.  This is quite different from the situation at the other 3 institutions.  Randy and Valerie will finish collecting this information for each site separately, then present the summary to this group.  Jesse pointed out that there would be clinical value at BIDMC in setting up the mi2b2 infrastructure for each collection to facilitate access and review of imaging data sets that are outside the main Radiology Department PACS.  All present were in agreement.  Might be out of scope for this initial ARRA project; however, if there is institutional interest and support we can seek additional resources (e.g. new grants or infrastructure funds) to enable this in the future. We will revisit this in the future.
 
−
<br>
 
−
*'''Granularity of Image Data transfer:''' Should mi2b2 retrieves be configured to transfer that medical image data at the study level, series level or image level? 
 
 
<br>
 
<br>
 +
 
'''On going Action Items'''
 
'''On going Action Items'''
−
# Finish amendments to each site i2b2 IRB to add mi2b2 study personnel
+
# mi2b2 installation at MGH then BWH this month, BIDMC next month
 +
# Finish amendment to CHB i2b2 IRB to add mi2b2 study personnel

Latest revision as of 01:00, 8 June 2010

Home < CTSC:ARRA.052510

Back to CTSC:ARRA supplement

Agenda

  • XNAT-mi2b2 integration
  • mi2b2 installation update
  • IRB update

Harvard Catalyst Medical Informatics group Meeting Minutes May 25, 2010

In attendance:

  • Yong Gao
  • Randy Gollub
  • Valerie Humblet
  • Wendy Plesniack
  • Paul Lamonica
  • Alex Zeitsev
  • Charles McGow
  • Ron Kikinis
  • Darren Sack
  • Mark Anderson (phone)
  • Jesse Wei (phone)
  • Dan Marcus (phone)


Meeting Minutes


  • XNAT-mi2b2 integration

Dan Marcus proposed a subgroup from this team and his team meet by phone the hour prior to next week's meeting to define the specific XNAT developments needed to support the mi2b2 project. Then that group will present their suggestions to this meeting to get further input. Dan suggested that Chris and his other i2b2 team members, Steve, Yong, Shawn, Dan, Tim and John from Wash U gather for the 9:30 AM pre-meeting call. Valerie will help coordinate.

  • mi2b2 STAR-D installation site update:
    • (BIDMC) Jesse and Chris's meeting with BIDMC Radiology IT went reasonably smoothly. They had no specific problems with it, but earliest date that they will be ready is July.
    • (BWH) Chris will make an appointment with Kathy to do the BWH install as soon as possible.
    • (MGH) Darren Sachs is trying to schedule time with Chris this Friday (needed to be rescheduled) for the installation.


  • IRB update: Jesse will wait to submit his IRB until his server is up and running. Bill and Paul finished their CITI training. Charles confirmed that Dan Nigrin has the info to add them and Chris to the CHB IRB.


On going Action Items

  1. mi2b2 installation at MGH then BWH this month, BIDMC next month
  2. Finish amendment to CHB i2b2 IRB to add mi2b2 study personnel
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