CTSC Simon Warfield, CHB

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Home < CTSC Simon Warfield, CHB

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Mission

Warfield_ALS_8-year-old-study. Description of big picture, goal(s) of project

Use-Case Goals

We will approach this use-case in three distinct steps, including Basic Data Management, Query Formulation and Processing Support.

Step 1. Basic Data Management.

  • Step 1a. Upload retrospective data
  • Step 1b. Upload new acquisitions as part of data management pipeline

Step 2. Query Formulation

Step 3. Processing Workflow support

Outcome Metrics

Step 1. Data Management

Step 2. Query Formulation

Step 3. Processing Support

Overall

Fundamental Requirements

Participants

  • PI, clinicians, IT staff, CT investigator, etc
  • staff missing

Data

Approximately 30 subjects currently, collection ongoing.

Data to manage in Step 1a:

  • MR structural (DICOM + NRRD)
  • MR Diffusion (DICOM + NRRD)
  • MR Functional (DICOM + NRRD)
  • Protocol and associated data files (ascii text (.txt) and matlab .mat)

Additional data to manage in Step 1b:

  • EEG
  • Clinical (paper intake, text)
  • Behavioral (paper intake, text)
  • MEG (Record + Photogrmty data, ascii text, European Data Format Plus (.edf))

Workflows

Current Data Management Process

Target Data Management Process (Step 1.)

Target Query Formulation (Step 2.)

Target Processing Workflow (Step 3.)

Other Information