Difference between revisions of "DBP:Harvard:Software:Minutes:11"

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''Agenda for 11-2-05 Meeting''
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''Agenda for 11-9-05 Meeting''
  
 
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# [[DBP:Harvard:Software:Testing:DTI:Slicer|Software Testing]], DTMRI module
 
# [[DBP:Harvard:Software:Testing:DTI:Slicer|Software Testing]], DTMRI module
#* Any updates for NRRD headers/caseD20?
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#* Any updates for NRRD headers/caseD20? (Raul)
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#* Gordon: NRRD headers for recent EPI scan?
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#** Want to show images (from emails)?
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#** Also, want to discuss new scan parameters mentioned over emails?
 
# [[DBP:Harvard:Software:Bugs:Corpus_Callosum|Corpus Callosum Diffusion Measures]]
 
# [[DBP:Harvard:Software:Bugs:Corpus_Callosum|Corpus Callosum Diffusion Measures]]
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#* We are currently examining differences between old/new labelmaps, etc.
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#* It does not appear to be a DICOM issue, but we will check.
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#* More details on this next week.
 
# [[DBP:Harvard:Software:Bugs:Corpus_Callosum_Fibers|Smoothing of Corpus Callosum Fibers ]]
 
# [[DBP:Harvard:Software:Bugs:Corpus_Callosum_Fibers|Smoothing of Corpus Callosum Fibers ]]
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#* Has anyone met about smoothing?
 
# Lauren: Fiber clustering, backtracking to corpus labelmap?
 
# Lauren: Fiber clustering, backtracking to corpus labelmap?
# KangUk, new DTI scan protocol? High resolution?
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#* Appears to be available in Slicer, so we need to test it on a few cases.
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#** Would it be better to test clustering on smoothed data?
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#* Limiting factor appears to be speed of clustering.
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# Cingulum Bundle Fiber Tracking
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#* See examples of labelmaps [[DBP:Harvard:Software:Bugs:2ROI|here]].
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#* We've been testing Raul's "2ROI" Module [[DBP:Harvard:Software:Bugs:Cingulum_Bundle_Fibers|here]].
  
 
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Revision as of 14:02, 18 December 2006

Home < DBP:Harvard:Software:Minutes:11

Agenda for 11-9-05 Meeting



  1. Software Testing, DTMRI module
    • Any updates for NRRD headers/caseD20? (Raul)
    • Gordon: NRRD headers for recent EPI scan?
      • Want to show images (from emails)?
      • Also, want to discuss new scan parameters mentioned over emails?
  2. Corpus Callosum Diffusion Measures
    • We are currently examining differences between old/new labelmaps, etc.
    • It does not appear to be a DICOM issue, but we will check.
    • More details on this next week.
  3. Smoothing of Corpus Callosum Fibers
    • Has anyone met about smoothing?
  4. Lauren: Fiber clustering, backtracking to corpus labelmap?
    • Appears to be available in Slicer, so we need to test it on a few cases.
      • Would it be better to test clustering on smoothed data?
    • Limiting factor appears to be speed of clustering.
  5. Cingulum Bundle Fiber Tracking
    • See examples of labelmaps here.
    • We've been testing Raul's "2ROI" Module here.


TO DO THIS WEEK


  1. FiberViewer testing: measure FA/trace along one fiber, and compare with Marc's Matlab scripts/output
  2. Mark & Sylvain, work on getting sagittal DTI onto NAMIC for UNC