Difference between revisions of "DBP changeover"

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= Motivation =
+
[[DBP_2007|Changeover 2007]]
 
 
* The original [http://grants1.nih.gov/grants/guide/rfa-files/RFA-RM-04-003.html '''RFA'''] specified the following: "The purpose of this core is to ensure that the research carried out in cores 1 and 2 has direct relevance to biomedical or behavioral research."
 
 
 
= The second generation of DBP's (announced on '''April 11 2006''') =
 
 
 
* funding will begin on Aug 1 2007
 
* [[DBP2:Harvard|Harvard]]
 
* [[DBP2:JHU|JHU]]
 
* [[DBP2:MIND|The Mind Institute]]
 
* [[DBP2:UNC|UNC]]
 
 
 
= Document Guidelines =
 
 
 
<br /> We are asking the new DBP's to write a document that will provide us with specific aims and additional information about their science and their goals for the participation in NA-MIC. '''Please send the document to Ron by Nov. 12.''' Ron will share the document with the other NA-MIC particpants.''' '''
 
 
 
The following topics should be covered:
 
 
 
* 1) Describe (very briefly) your research goals
 
** Clinical/scientific relevance
 
** What hypotheses are your considering?
 
** (or) What kinds procedures are you trying to improve or enable?
 
* 2) Describe your data
 
** What kind of image data is associated with these goals (modality, resolution, quantitity)?
 
** What other kinds of data is involved (non image)?
 
** What amount of data has been collected to date and what will be collected in the next 12-24 months?
 
** What information would you like to be able to extract from these images that you are currently unable to?
 
* 3) Describe your image processing needs
 
** What kinds of image processing tasks are needed?
 
*** Consider filtering, segmentation, registration, shape analysis, etc.
 
*** What are the inputs?
 
*** What are the outputs?
 
*** What are the other important factors such as user input, turn-around time, etc.?
 
* 4) Describe the state of your image processing technology
 
** What tools are your currently using (Software Algorithms)?
 
** What are the successes and shortcomings of those tools?
 
* 5) What will you do with the NA-MIC kit
 
** What are your plans with [[Slicer3:Status|3D Slicer, version 3]]
 
** What procedures will you transition
 
** Who will do the work
 
** What will be done in detail?
 
* 6) In what way and in what direction will your research drive NA-MIC
 
* 7) Summarize what you hope to gain from this project
 
 
 
= Sample Job description for the software engineer =
 
 
 
Image Computing Applications Engineer:
 
 
 
* Summary: The engineer will work closely with local user community to integrate NA-MIC Kit software into local research workflows. The engineer will work with the NA-MIC algorithm and software developers to develop implementation strategies to meet the needs of local users by adapting and/or extending existing code in the NA-MIC Kit. Examples of the engineering work required include writing code to integrate several filters into a pipeline, building user interfaces to algorithms, converting data file formats, and automating repetitive analysis tasks.
 
 
 
* Duties:
 
** Define and specify user requirements for new software.
 
** Implement solutions in collaboration with other NA-MIC personnel.
 
** Support use of new solutions by local users.
 
** Disseminate solutions to broader community through adherence to NA-MIC software practices including publicly readable repositories, design material and documentation on public wiki, participation in email lists to support users and developers.
 
 
 
* Qualifications:
 
** BS Computer Science or equivalent. Knowledge of medical image processing a plus.
 
 
 
* Other Requirements:
 
** Willingness and ability to develop "production" quality code adhering to existing design standards.
 
** Knowledge of C++ essential.
 
** Cross-platform software development experience (Windows and Linux; Mac a plus).
 
** Experience with NA-MIC Kit tools a plus (CMake, VTK, ITK, KWWidgets, 3D Slicer).
 
 
 
<br />
 
 
 
= Selection Process =
 
 
 
see [[Dbp2_selection|here]]
 

Revision as of 18:49, 20 March 2008

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