Difference between revisions of "Downloads"
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[http://insight-journal.org/midas/collection/view/190 Brain: Multi-modality (sMRI, DTI, fMRI)]<br> | [http://insight-journal.org/midas/collection/view/190 Brain: Multi-modality (sMRI, DTI, fMRI)]<br> | ||
| − | There are 20 cases: ten are Normal Controls and ten are Schizophrenic. Each case includes a weighted T1 scan, a weighted T2 scan, an fMRI scan, a DTI volume, the DWI with 51 directions, and several masks and labelmaps. | + | There are 20 cases: ten are Normal Controls and ten are Schizophrenic. Each case includes a weighted T1 scan, a weighted T2 scan, an fMRI scan, a DTI volume, the DWI with 51 directions, and several masks and labelmaps. Available from Harvard. |
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| − | [http://insight-journal.org/midas/community/view/24 Brain: 2-4 Year Old] | + | [http://insight-journal.org/midas/community/view/24 Brain: 2-4 Year Old]<br> |
| + | Data for 2 autistic children and 2 normal controls (male, female) scanned at 2 years with follow up at 4 years from a 1.5T Siemens scanner. Files include structural data, tissue segmentation label map and subcortical structures segmentation. Available from UNC. | ||
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[http://insight-journal.org/midas/community/view/25 Prostate: 5 cases] | [http://insight-journal.org/midas/community/view/25 Prostate: 5 cases] | ||
| + | Sagittal and axial scans, with and without needle. Available from Queens. | ||
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| − | [http://central.xnat.org/app/template/XDATScreen_report_xnat_projectData.vm/search_element/xnat:projectData/search_field/xnat:projectData.ID/search_value/NCIGT_PROSTATE Prostate: 10 cases] | + | [http://central.xnat.org/app/template/XDATScreen_report_xnat_projectData.vm/search_element/xnat:projectData/search_field/xnat:projectData.ID/search_value/NCIGT_PROSTATE Prostate: 10 cases]<br> |
| + | MRI Prostate data. 10 datasets, including a derived segmentation series with labelmaps. Available from Harvard. | ||
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[http://insight-journal.org/midas/collection/view/189 Prostate: Transrectal Tutorial Dataset] | [http://insight-journal.org/midas/collection/view/189 Prostate: Transrectal Tutorial Dataset] | ||
| + | Transrectal Prostate Biopsy Tutorial Dataset. Walks the user through: Calibration (calibration image for the APT-MRI device), Segmentation (prostate MRI image and seeds for random walk segmentation algorithm), Targeting (target planning prostate MRI image), and Verification (needle insertion verification image). Available from Queens. | ||
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Revision as of 15:01, 11 March 2010
Home < DownloadsThe following is a collection of electronic resources provided by NA-MIC. This includes software, data, tutorials, presentations, and additional documentation.
Software
Data
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Brain: Multi-modality (sMRI, DTI, fMRI) | |
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Brain: 2-4 Year Old | |
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Prostate: 5 cases Sagittal and axial scans, with and without needle. Available from Queens. | |
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Prostate: 10 cases | |
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Prostate: Transrectal Tutorial Dataset Transrectal Prostate Biopsy Tutorial Dataset. Walks the user through: Calibration (calibration image for the APT-MRI device), Segmentation (prostate MRI image and seeds for random walk segmentation algorithm), Targeting (target planning prostate MRI image), and Verification (needle insertion verification image). Available from Queens. | |
Tutorials
Tutorials for Biomedical Engineers and Clinical Research Users of the NA-MIC Kit
- Python Stochastic Tractography Module
- White Matter Lesion Classification
- Trans-rectal MR guided prostate biopsy and PerkStationSlicerTutorial
- ARCTIC: Automatic Regional Cortical ThICkness
- Confocal Microscopy
- Non-human Primates Segmentation Tutorial
- Hammer Registration for Brain MRI
- Centerline Extraction of Coronary Arteries using VMTK
- EM Fiber Clustering
Additional Tutorials
