Difference between revisions of "EPI Correction in Slicer3"

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__NOTOC__
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<gallery>
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Image:PW2009-v3.png|[[2009_Summer_Project_Week#Projects|Projects List]]
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Image:01053_before.png|Before correction
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Image:01053_after.png|After correction
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</gallery>
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==Key Investigators==
 
==Key Investigators==
Ran Tao, Jim Miller, Sylvain Bouix, Tom Fletcher, Ross Whitaker, Julien de Siebenthal
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* GE: Jim Miller
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* BWH: Sylvain Bouix, Julien de Siebenthal
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* Utah: Ran Tao, Tom Fletcher, Ross Whitaker
  
 
<div style="margin: 20px;">
 
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<h3>Objective</h3>
 
<h3>Objective</h3>
The objective of this project is to integrate  EPI distortion correction module into Slicer.
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The objective of this project is to integrate  EPI distortion correction module into Slicer, which implement the variational method.
  
 
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<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
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Our goals for the project week are:
 
Our goals for the project week are:
1.Integrate EPI distortion correction module into Slicer3
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*Integrate EPI distortion correction module into Slicer3
2.Perform and evaluate results on BWH brain dataset.
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*Perform and evaluate results on BWH brain dataset.
  
 
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<h3>Progress</h3>
 
<h3>Progress</h3>
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*The code is integrated into Slicer3.
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*Compare to the results with B-spline registration
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</div>
 
</div>
 
</div>
 
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<div style="width: 97%; float: left;">
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==References==
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*[http://www.cs.utah.edu/~rantao/OpenSource/EPICorrectionCode.tgz EPI Correction Code]

Latest revision as of 15:05, 6 July 2009

Home < EPI Correction in Slicer3


Key Investigators

  • GE: Jim Miller
  • BWH: Sylvain Bouix, Julien de Siebenthal
  • Utah: Ran Tao, Tom Fletcher, Ross Whitaker

Objective

The objective of this project is to integrate EPI distortion correction module into Slicer, which implement the variational method.

Approach, Plan

Our goals for the project week are:

  • Integrate EPI distortion correction module into Slicer3
  • Perform and evaluate results on BWH brain dataset.

Progress

  • The code is integrated into Slicer3.
  • Compare to the results with B-spline registration