Difference between revisions of "Events:3DSlicer Booth OHBM 2011"

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*Description:  
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Daily 3DSlicer demos will be held as part of the NeuroDebian booth at the Organization for Human Brain Mapping Conference (OHBM 2011, June 26-30, Quebec City, Canada).
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[ here dominique adds info on what will be presented]
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==Presentation==
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Daily 3DSlicer hands-on demos with sample datasets will be held as part of the [http://neuro.debian.net/ NeuroDebian] booth at the [http://www.humanbrainmapping.org/hbm2011/ 17th Annual Meeting of the Organization for Human Brain Mapping (OHBM 2011)  June 26-30, Quebec City, Canada]. The purpose of the exhibit will be to introduce members of the OHBM community to the capabilities of the 3DSlicer software. The demonstrations will include MRI-based automatic parcellation of brain structures and volume rendered head scans.
  
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==Logistics==
 
*Presenter: Dominique Belhachemi, UPenn
 
*Presenter: Dominique Belhachemi, UPenn
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*Date:June 27-30, 2011  
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*Date: June 27-30, 2011  
 
*Schedule:
 
*Schedule:
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*Location: OHBM Booth #108, Quebec City, Canada
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** Monday, June 27: 12:00 – 16:00 <br>
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** Tuesday, June 28: 12:00 – 19:30 <br>
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*Location: OHBM Booth #108, Centre des Congres de Québec City, Québec City, Canada
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==3DSlicer Demos==
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All demonstrations will be run with the Slicer3.6.3 version of the software, available for download on the [http://www.slicer.org 3DSlicer website].
 
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! DEMO !! Status !! Datasets !! Notes
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! DEMO !! Datasets !! Notes
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| Volume Rendering || OK on wintest || [[File:RSNA2010_OsirixManixDataset.zip]] || show cropping, transfer functions, GPU, slice composite view
 
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| Volume Rendering || OK on wintest || [[File:RSNA2010_OsirixPanoramixDataset.zip]] || show cropping, transfer functions, GPU, slice composite view
 
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| Volume Rendering || OK on wintest|| [[File:RSNA2010_Lungs_Dataset.zip]] || show cropping, transfer functions, GPU, slice composite view
 
 
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| Editor & Tractography || Use4Demo.mrml contains registered dataset, and should be used on non-windows system (memory limit); Use4DemoOnWindows.mrml is for 32-bit windows || [[File:RSNA2010_fMRICase040Dataset.zip]] || GrowCut segmentation, Editor, tractography, registration, navigation mode in lightbox
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| EM Segmenter || [[File:RSNA2010_EMS.zip]] || registration, segmentation https://www.slicer.org/wiki/EMSegmenter-Tasks
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Registration for this case is described in [[Projects:RegistrationLibrary:RegLib_C33 |Registration Library Case 33]]
 
 
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| ChangeTracker || OK on wintest || [[File:RSNA2010_ChangeTrackerDataset.zip |ChangeTracker tutorial dataset]] || answer questions from tutorial
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| Volume Rendering || [[File:RSNA2010_OsirixManixDataset.zip]] || show cropping, transfer functions, GPU, slice composite view
 
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| Prostate Imaging Applications || OK on wintest || [[File:RSNA2010_Prostate.zip]] || multi-parametric MRI visualization , lightbox, quantitative imaging, registration, IGT
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| Volume Rendering || [[File:RSNA2010_OsirixPanoramixDataset.zip]] || show cropping, transfer functions, GPU, slice composite view
 
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| EM Segmenter || OK on wintest || [[File:RSNA2010_EMS.zip]] || registration, segmentation '''Warning: can run out of memory quickly on Windows, be careful and restart Slicer after working with this demo'''
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| Volume Rendering || [[File:RSNA2010_Lungs_Dataset.zip]] || show cropping, transfer functions, GPU, slice composite view
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| PET/CT SUV Analysis || OK on wintest || [[File:PETCTFusion-Tutorial-Data.zip]] || quantitative assessment of tumor response to treatment
 
 
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Back to [http://www.na-mic.org/Wiki/index.php/Events NA-MIC Events]

Latest revision as of 17:15, 10 July 2017

Home < Events:3DSlicer Booth OHBM 2011
Ohbm logo.jpg
NAMIC.jpg Logo nac.gif NCIGTlogo.gif

Presentation

Daily 3DSlicer hands-on demos with sample datasets will be held as part of the NeuroDebian booth at the 17th Annual Meeting of the Organization for Human Brain Mapping (OHBM 2011) June 26-30, Quebec City, Canada. The purpose of the exhibit will be to introduce members of the OHBM community to the capabilities of the 3DSlicer software. The demonstrations will include MRI-based automatic parcellation of brain structures and volume rendered head scans.

Logistics

  • Presenter: Dominique Belhachemi, UPenn
  • Date: June 27-30, 2011
  • Schedule:
    • Monday, June 27: 12:00 – 16:00
    • Tuesday, June 28: 12:00 – 19:30
  • Location: OHBM Booth #108, Centre des Congres de Québec City, Québec City, Canada

3DSlicer Demos

All demonstrations will be run with the Slicer3.6.3 version of the software, available for download on the 3DSlicer website.

DEMO Datasets Notes
EM Segmenter File:RSNA2010 EMS.zip registration, segmentation https://www.slicer.org/wiki/EMSegmenter-Tasks
Volume Rendering File:RSNA2010 OsirixManixDataset.zip show cropping, transfer functions, GPU, slice composite view
Volume Rendering File:RSNA2010 OsirixPanoramixDataset.zip show cropping, transfer functions, GPU, slice composite view
Volume Rendering File:RSNA2010 Lungs Dataset.zip show cropping, transfer functions, GPU, slice composite view



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