Difference between revisions of "Events:August2008XNATDesktop"
From NAMIC Wiki
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** XND User Interface Review with Wendy | ** XND User Interface Review with Wendy | ||
* People: Misha, Kevin, Wendy, Nicole, Steve | * People: Misha, Kevin, Wendy, Nicole, Steve | ||
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| + | |||
| + | |||
| + | === Other Topics === | ||
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| + | Misha to meet with Bernhard about deidentification algorithms for full body CT scans. | ||
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=Use-case scenarios= | =Use-case scenarios= | ||
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**I would like to upload stuff that is currently in Slicer | **I would like to upload stuff that is currently in Slicer | ||
**I would like to download a mrml file and all associated data files. | **I would like to download a mrml file and all associated data files. | ||
| + | |||
| + | =notes:= | ||
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| + | Use case for discussion (XNAT tools extension): | ||
| + | [http://www.slicer.org/slicerWiki/index.php/Slicer3:XCEDE_use_cases#Slicer_use-case_.230:_Demo_we_would_like_to_show_for_BIRN Slicer use case] | ||
| + | |||
| + | * StoreXAR doesn't currently have this functionality | ||
| + | * Tim's suggested workaround for now: separately request a catalog of all files for a given session id. This is similar to what would be returned by StoreXAR as described in the use case. | ||
| + | * [http://central.xnat.org/archive/catalogs/xnat:imageSessionData/BC_CT_TOR_1_1 log into central.xnat.org and click this link to see catalog] | ||
| + | * There's not currently a commandline executable -- we will have to write this. | ||
| + | * The HTTP Session ID needs to be attached to the HTTP Request. | ||
=Advantage Windows experience= | =Advantage Windows experience= | ||
Revision as of 15:00, 13 August 2008
Home < Events:August2008XNATDesktopPlans for the Integration of XNAT desktop and Slicer
Contents
Visit of XNAT team to Boston
- Tentative Date: August 21-22nd
- Location: 1249 Boylston Street, 2nd floor demo room
- Agenda/Goals
- Attempt to get base use case worked through
- upload files to XND
- query for them
- download them as a group
- modify them in slicer
- re-upload new files with tags
- TBD: thursday evening discussion with Dan Blezek
- XND User Interface Review with Wendy
- Attempt to get base use case worked through
- People: Misha, Kevin, Wendy, Nicole, Steve
Other Topics
Misha to meet with Bernhard about deidentification algorithms for full body CT scans.
Use-case scenarios
External examples
The available images are displayed as small icons with annotation. User drags images to the display port.
Available date is displayed in an hierarchical text and icon representation
Use Scenario 1
- I am using Slicer on my laptop and would like to use XNAT desktop to keep data organized on my hard disk
Capabilities needed
- how to set up when I download slicer?
- I am upgrading Slicer do I need to upgrade xnat as well?
- I worked today on a case. I would like to add my derived data and new mrml file to the existing stuff.
- I would like to upload stuff that is currently in Slicer
- I would like to download a mrml file and all associated data files.
notes:
Use case for discussion (XNAT tools extension): Slicer use case
- StoreXAR doesn't currently have this functionality
- Tim's suggested workaround for now: separately request a catalog of all files for a given session id. This is similar to what would be returned by StoreXAR as described in the use case.
- log into central.xnat.org and click this link to see catalog
- There's not currently a commandline executable -- we will have to write this.
- The HTTP Session ID needs to be attached to the HTTP Request.
Advantage Windows experience
Reference
http://slicer.spl.harvard.edu/slicerWiki/index.php/Slicer3:XCEDE_use_cases#XCEDE_REST_Interface
