Difference between revisions of "Explore integration of Web-based imaging workflows with Slicer"

Revision as of 13:18, 13 January 2017

Home < Explore integration of Web-based imaging workflows with Slicer

Objective	Approach and Plan	Progress and Next Steps
Explore how Slicer can interact with an existing web-based, open-source workflow system (Flow, developed by Kitware and KnowledgeVis, LLC) Exchange data between 3D Slicer and the Flow workflow system	Load a MRML scene into Slicer and read images into Flow by accessing through Slicer's RestAPI Use Steve's (work in progress) SlicerWeb Extension to respond to REST requests from Flow Connect with Girder-breakout team to discuss data sharing between systems (Slicer, Girder, Flow, etc.) (after project week), expand to work for whole NRRD image that comes from the REST API.	Hosted Slicer locally and was able to reach the REST API, extracting Retrieved a 2D Slice from Slicer and automatically ran it through a small workflow Next is to retrieve named volumes as 3D NRRD format volume

The Flow source code is available here: https://github.com/Kitware/flow

@@ Line 3: / Line 3: @@
 Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
 Image:Flow-screen-shot-01-2017.png |Workflow from web-based Flow system
+Image:Outimage.png|Image as received from SlicerWeb
+Image:Rotated and blurred.png | Result after running workflow
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