Difference between revisions of "July31T-con/PlayingWithTheDiffusionData"

From NAMIC Wiki
Jump to: navigation, search
(diffusion data downsampling test)
(No difference)

Revision as of 15:56, 3 August 2007

Home < July31T-con < PlayingWithTheDiffusionData

Exploring the Upsampling of the BWH Diffusion Data

Extracting one a slice for one of the gradient directions of the diffusion data results in an image like this:

Original.png

A two-dimensional Fourier transform leads the following magnitude images (uncentered and centered):

Fouriermagnitude.png Fouriermagnitude-centered.png

Representing this in the log-domain results in

Logfouriermagnitude.png Logfouriermagnitude-centered.png

Cutting away everything that should ideally be zero gives this Fourier log-image:

Logfouriermagnitude-centered-and-cut.png

An inverse Fourier transform followed by discretization results in:

Reconstructed.png

The result is slighly smoother than the original, which is sensible since we essentially low-pass filtered the result.

The difference between original and reconstruction is not great, but still shows a little bit of structure:

Reconstruction-diffference.png


In case you want to recreate the results. Here is the matlab script dwiTstScript.m. And here is the data SampleDWIDataSlice.tar.gz.