Difference between revisions of "MICCAI 2010 Tutorial Notes"

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* Introduction and goals of the workshop (no materials)
 
* Introduction and goals of the workshop (no materials)
* Overview of the National Alliance for Medical Image Computing (NA-MIC) (Kikinis)
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* [[media:Slicer-Overview-NC-2010-08-11.ppt|Overview of the National Alliance for Medical Image Computing (NA-MIC)]] (Kikinis)
* [[media: NAMIC_Programming_Environment_SoniaPujol_draft.pdf‎ | NA-MIC Programming Environment - SPujol]]
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* [[media:NAMIC_Programming_Environment_MICCAI2010_SoniaPujol.pdf‎   | NA-MIC Programming Environment - SPujol]]
* 'Hardening' your software with the NA-MIC kit, regression tests and dashboard (Aylward/Tao)
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* [[media:NAMIC_Testing_MICCAI2010_XiaodongTao.pdf‎ |  'Hardening' your software with the NA-MIC kit, regression tests and dashboard (Aylward/Tao)]]
 
* [[media:BuildingBridgesBetweenSoftwarePlatforms_MICCAI2010_SoniaPujol.pdf‎ | Building bridges between complementary medical image analysis platforms (e.g. Freesurfer, BRAINS2, HAMMER) ]](Pujol)
 
* [[media:BuildingBridgesBetweenSoftwarePlatforms_MICCAI2010_SoniaPujol.pdf‎ | Building bridges between complementary medical image analysis platforms (e.g. Freesurfer, BRAINS2, HAMMER) ]](Pujol)
* How to participate in NA-MIC: collaboration grants, user and developer community (Kikinis)
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* [[media:Slicer-Overview-NC-2010-08-11.ppt|How to participate in NA-MIC: collaboration grants, user and developer community]] (Kikinis)
* Image Registration (Dinggang Shen)
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* [[media:MICCAI2010_NAMIC_Tutorial_HAMMER_ShenDG.pdf | Image Registration (Dinggang Shen) ]]
* Image Segmentation: EM Segmenter (Pohl)
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* [[media:MICCAI10-Tutorial-Pohl.pdf | Image Segmentation and Automatic Brain Segmentation: EM Segmenter (Pohl/Gerig) ]]
* Automatic Brain Segmentation (Gerig)
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* [[media:2010_09_CortThick-NAMIC-MICCAI.pdf | Cortical Thickness Measurements (Styner)]]
* Cortical Thickness Measurements (Styner)
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* [[media:DiffusionMRI_Tools_Applications_SoniaPujol_MICCAI2010.pdf‎ | Diffusion Tensor Imaging ]] (Gerig/Pujol/Styner)
* Diffusion Tensor Imaging (Gerig/Pujol/Styner)
 
 
* Image-Guided Therapy (Hata)  
 
* Image-Guided Therapy (Hata)  
* Other examples from the community (Kikinis)
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**[http://www.slicer.org/slicerWiki/images/b/ba/SlicerNeurosurgeryTutorial-3.6.1.ppt Neurosurgery Slide (posted at Slicer.org)]
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**[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Data (posted at Slicer.org)]
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* [http://www.slicer.org/pages/Slicer_Community Other examples from the community] (Kikinis)
 
* Optional Hands-on Session: Interfacing your MICCAI algorithm with the NA-MIC open-source toolkit: the ‘Hello Python’ tutorial (Pujol)
 
* Optional Hands-on Session: Interfacing your MICCAI algorithm with the NA-MIC open-source toolkit: the ‘Hello Python’ tutorial (Pujol)
** Link to Slicer3.6.1 release version (Windows)
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** Windows: [http://www.na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.1-2010-08-23-win32.exe Slicer3-3.6.1-2010-08-23-win32.exe]
** Link to Slicer3.6.1 release version (Linux 64)
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** Linux 64: [http://www.na-mic.org/Slicer/Download/Release/linux-x86_64/Slicer3-3.6.1-2010-08-23-linux-x86_64.tar.gz Slicer3-3.6.1-2010-08-23-x86_64]
** Link to Slicer3.6.1 release version (Linux 32)
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** Linux 32: [http://www.na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6.1-2010-08-20-linux-x86.tar.gz Slicer3-3.6.1-2010-08-20-x86 ]
** Link to Slicer3.6.1 release version (Mac Darwin)
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** Mac Darwin: [http://www.na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.1-2010-08-20-darwin-x86.tar.gz Slicer3-3.6.1-2010-08-20-darwin-x86]
 
** [[media:HelloPython.zip‎ | HelloPythonDataset.zip]]
 
** [[media:HelloPython.zip‎ | HelloPythonDataset.zip]]
  

Latest revision as of 06:18, 15 September 2010

Home < MICCAI 2010 Tutorial Notes

Note to Tutorial Speakers: please post below the material of your presentation to be included in a USB key for the tutorial participants.

As requested by MICCAI organizers, the dead-line for submitting the materials is August 15,2010.


NA-MIC Tutorial at MICCAI 2010: list of materials to include (slides, publications, software, data...)


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