Difference between revisions of "MICCAI 2010 Tutorial Notes"
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* Introduction and goals of the workshop (no materials) | * Introduction and goals of the workshop (no materials) | ||
| − | * Overview of the National Alliance for Medical Image Computing (NA-MIC) (Kikinis) | + | * [[media:Slicer-Overview-NC-2010-08-11.ppt|Overview of the National Alliance for Medical Image Computing (NA-MIC)]] (Kikinis) |
| − | * [[media: NAMIC_Programming_Environment_MICCAI2010_SoniaPujol.pdf | NA-MIC Programming Environment - SPujol]] | + | * [[media:NAMIC_Programming_Environment_MICCAI2010_SoniaPujol.pdf | NA-MIC Programming Environment - SPujol]] |
| − | * 'Hardening' your software with the NA-MIC kit, regression tests and dashboard (Aylward/Tao) | + | * [[media:NAMIC_Testing_MICCAI2010_XiaodongTao.pdf | 'Hardening' your software with the NA-MIC kit, regression tests and dashboard (Aylward/Tao)]] |
* [[media:BuildingBridgesBetweenSoftwarePlatforms_MICCAI2010_SoniaPujol.pdf | Building bridges between complementary medical image analysis platforms (e.g. Freesurfer, BRAINS2, HAMMER) ]](Pujol) | * [[media:BuildingBridgesBetweenSoftwarePlatforms_MICCAI2010_SoniaPujol.pdf | Building bridges between complementary medical image analysis platforms (e.g. Freesurfer, BRAINS2, HAMMER) ]](Pujol) | ||
| − | * How to participate in NA-MIC: collaboration grants, user and developer community (Kikinis) | + | * [[media:Slicer-Overview-NC-2010-08-11.ppt|How to participate in NA-MIC: collaboration grants, user and developer community]] (Kikinis) |
| − | * Image Registration (Dinggang Shen) | + | * [[media:MICCAI2010_NAMIC_Tutorial_HAMMER_ShenDG.pdf | Image Registration (Dinggang Shen) ]] |
| − | * Image Segmentation: EM Segmenter (Pohl | + | * [[media:MICCAI10-Tutorial-Pohl.pdf | Image Segmentation and Automatic Brain Segmentation: EM Segmenter (Pohl/Gerig) ]] |
| − | + | * [[media:2010_09_CortThick-NAMIC-MICCAI.pdf | Cortical Thickness Measurements (Styner)]] | |
| − | * Cortical Thickness Measurements (Styner) | + | * [[media:DiffusionMRI_Tools_Applications_SoniaPujol_MICCAI2010.pdf | Diffusion Tensor Imaging ]] (Gerig/Pujol/Styner) |
| − | * Diffusion Tensor Imaging (Gerig/Pujol/Styner) | ||
* Image-Guided Therapy (Hata) | * Image-Guided Therapy (Hata) | ||
| − | * Other examples from the community (Kikinis) | + | **[http://www.slicer.org/slicerWiki/images/b/ba/SlicerNeurosurgeryTutorial-3.6.1.ppt Neurosurgery Slide (posted at Slicer.org)] |
| + | **[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Data (posted at Slicer.org)] | ||
| + | * [http://www.slicer.org/pages/Slicer_Community Other examples from the community] (Kikinis) | ||
* Optional Hands-on Session: Interfacing your MICCAI algorithm with the NA-MIC open-source toolkit: the ‘Hello Python’ tutorial (Pujol) | * Optional Hands-on Session: Interfacing your MICCAI algorithm with the NA-MIC open-source toolkit: the ‘Hello Python’ tutorial (Pujol) | ||
| − | ** Windows: http://www.na-mic.org/Slicer/Download/ | + | ** Windows: [http://www.na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.1-2010-08-23-win32.exe Slicer3-3.6.1-2010-08-23-win32.exe] |
| − | ** Linux 64: http://www.na-mic.org/Slicer/Download/ | + | ** Linux 64: [http://www.na-mic.org/Slicer/Download/Release/linux-x86_64/Slicer3-3.6.1-2010-08-23-linux-x86_64.tar.gz Slicer3-3.6.1-2010-08-23-x86_64] |
| − | ** Linux 32: http://www.na-mic.org/Slicer/Download/ | + | ** Linux 32: [http://www.na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6.1-2010-08-20-linux-x86.tar.gz Slicer3-3.6.1-2010-08-20-x86 ] |
| − | ** Mac Darwin: http://www.na-mic.org/Slicer/Download/ | + | ** Mac Darwin: [http://www.na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.1-2010-08-20-darwin-x86.tar.gz Slicer3-3.6.1-2010-08-20-darwin-x86] |
** [[media:HelloPython.zip | HelloPythonDataset.zip]] | ** [[media:HelloPython.zip | HelloPythonDataset.zip]] | ||
Latest revision as of 06:18, 15 September 2010
Home < MICCAI 2010 Tutorial NotesNote to Tutorial Speakers: please post below the material of your presentation to be included in a USB key for the tutorial participants.
As requested by MICCAI organizers, the dead-line for submitting the materials is August 15,2010.
NA-MIC Tutorial at MICCAI 2010: list of materials to include (slides, publications, software, data...)
- Introduction and goals of the workshop (no materials)
- Overview of the National Alliance for Medical Image Computing (NA-MIC) (Kikinis)
- NA-MIC Programming Environment - SPujol
- 'Hardening' your software with the NA-MIC kit, regression tests and dashboard (Aylward/Tao)
- Building bridges between complementary medical image analysis platforms (e.g. Freesurfer, BRAINS2, HAMMER) (Pujol)
- How to participate in NA-MIC: collaboration grants, user and developer community (Kikinis)
- Image Registration (Dinggang Shen)
- Image Segmentation and Automatic Brain Segmentation: EM Segmenter (Pohl/Gerig)
- Cortical Thickness Measurements (Styner)
- Diffusion Tensor Imaging (Gerig/Pujol/Styner)
- Image-Guided Therapy (Hata)
- Other examples from the community (Kikinis)
- Optional Hands-on Session: Interfacing your MICCAI algorithm with the NA-MIC open-source toolkit: the ‘Hello Python’ tutorial (Pujol)
- Windows: Slicer3-3.6.1-2010-08-23-win32.exe
- Linux 64: Slicer3-3.6.1-2010-08-23-x86_64
- Linux 32: Slicer3-3.6.1-2010-08-20-x86
- Mac Darwin: Slicer3-3.6.1-2010-08-20-darwin-x86
- HelloPythonDataset.zip
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