NA-MIC/Projects/Diffusion Image Analysis/FreeSurfer NRRD IO

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Home < NA-MIC < Projects < Diffusion Image Analysis < FreeSurfer NRRD IO

Project: Adding NRRD IO support to FreeSurfer

Use case: 'Open a NRRD volume in FreeSurfer.'

Use case: 'Convert an MGH volume to a NRRD volume with Freesurfer.'

Use case: 'Open NRRD formatted DWI data in Freesurfer.'

Difficulty: Low

Impact: Medium


Steps:

  1. Write unit tests for new IO functions (Snyder): in progress
  2. Add NrrdIO libraries from Teem to FS source tree, build with autoconf (Snyder): done
  3. Write and test FS NRRD IO functions (Snyder, Kindlmann): in progress
  4. Develop approriate headers for MGH DWI data (Teich): queued
  5. Automate header generation when possible (Teich): queued