Difference between revisions of "October 08 2009 Meeting: VT-NAMIC Revised atlas construction workflow"

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(Created page with '== Software == * Slicer/extensions versioning == Workflow == TODO: * link the software tools and scripts with the workflow * prepare a branch in the sandbox with the tools no…')
 
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== TODOs ==
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* link the software tools and scripts with the workflow
 +
* prepare a branch in the sandbox with the tools not available in Slicer (confirm with Chris copyright issues)
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== Software ==
 
== Software ==
  
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== Workflow ==
 
== Workflow ==
 
TODO:
 
* link the software tools and scripts with the workflow
 
* prepare a branch in the sandbox with the tools not available in Slicer (confirm with Chris copyright issues)
 
  
 
# Prepare the data using the instructions -- LINK
 
# Prepare the data using the instructions -- LINK

Revision as of 19:22, 8 October 2009

Home < October 08 2009 Meeting: VT-NAMIC Revised atlas construction workflow

TODOs

  • link the software tools and scripts with the workflow
  • prepare a branch in the sandbox with the tools not available in Slicer (confirm with Chris copyright issues)


Software

  • Slicer/extensions versioning

Workflow

  1. Prepare the data using the instructions -- LINK
  2. Gradient anisotropic diffusion -- PARAMETERS
  3. BRAINSFit initial registration -- PARAMETERS -- failure to recover the pose for Hugo and Valentino
  4. Manual pose alignment for Hugo and Valentino