Projects:DiffusionGraphBasedConnectivity

From NAMIC Wiki
Revision as of 22:15, 1 April 2011 by Ipek (talk | contribs)
Jump to: navigation, search
Home < Projects:DiffusionGraphBasedConnectivity
Back to UNC Algorithms


Muti-directional graph propagation for Diffusion Imaging based Connectivity

This project focuses on connectivity measurements derived from diffusion imaging datasets in order to better understand cortical and subcortical white matter connectivity. Our research employs a novel, multi-directional graph propagation method that performs a fully deterministic, efficient and stable connectivity computation. The method handles crossing fibers and deals well with multiple seed regions. In addition to the analysis of these connectivity measures in describing brain pathology, they can also be used as scalar maps for use in DTI registration.

Description

Slicer visualization of genu connectivity map overlaid on streamline genu tracts

Regional connectivity measurements derived from diffusion imaging datasets are of considerable interest in the neuroimaging community for better understanding white matter connectivity. Current connectivity measurements are usually either based on fiber tractography applied in a Monte-Carlo fashion or are variations of the Hamilton-Jacobi approach.

We propose a novel, graph-based algorithm that provides a fully deterministic, efficient and stable connectivity measure. This method handles crossing fibers and deals well with multiple seed regions. The computation is based on a multi-directional graph propagation algorithm applied to sampled orientation distribution functions computed directly from the original diffusion imaging data. A maximum probability and a minimum cost approach are both possible.

So far we have results on synthetic and limited real datasets to illustrate the potential of our method towards subject-specific connectivity measurements performed in an efficient, stable and reproducible manner. Such individual connectivity measurements would be well suited for studies of neuropathology.

Average cost map computed on the rhesus monkey DWI atlas with the source located in the internal capsule (left) and the genu of the corpus callosum (right). The grayscale overlays show the FA map, and the 3D visualizations include the streamline tractography results from the same seed regions for comparison purposes.

Publications

Key Investigators

  • UNC Algorithms: Ipek Oguz, Alexis Boucharin, Yundi Shi, Martin Styner

Links