Difference between revisions of "Projects:FreeSurferNumericalRecipiesReplacement"
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| − | + | Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]], [[Algorithm:MGH|MGH Algorithms]] | |
| − | + | = FreeSurfer Numerical Recipies Replacement = | |
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| + | Our objective is to replace algorithms using proprietary numerical recipes in FreeSurfer in efforts to open source FreeSurfer. | ||
| − | + | = Description = | |
''Status:'' Completed. | ''Status:'' Completed. | ||
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# Integrate required libraries into FreeSurfer build process (Snyder, Jen): '''done''' | # Integrate required libraries into FreeSurfer build process (Snyder, Jen): '''done''' | ||
# Iteratively replace recipes with substitutes and run tests (Snyder, Jen): '''done''' | # Iteratively replace recipes with substitutes and run tests (Snyder, Jen): '''done''' | ||
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| + | =Key Investigators = | ||
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| + | = Publications = | ||
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| + | = Links = | ||
Revision as of 17:57, 22 September 2007
Home < Projects:FreeSurferNumericalRecipiesReplacementBack to NA-MIC_Collaborations, MGH Algorithms
Contents
FreeSurfer Numerical Recipies Replacement
Our objective is to replace algorithms using proprietary numerical recipes in FreeSurfer in efforts to open source FreeSurfer.
Description
Status: Completed.
- 12 numerical recipes replaced with open source alternatives, mainly using VXL.
- 14 unit tests run nightly.
- Use case: 'Unit tests pass with all replacements.'
- Difficulty: Medium-High
- Impact: High
- Write test cases for each algorithm (Snyder, Jen): done
- Identify replacements (Snyder, Jen): done
- Integrate required libraries into FreeSurfer build process (Snyder, Jen): done
- Iteratively replace recipes with substitutes and run tests (Snyder, Jen): done
