Difference between revisions of "Projects:RegistrationDocumentation:DocumentationResources"

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(Created page with '**Topics for background tutorials: **the main components: transform, similarity function, optimization, interpolation **coordinate systems: physical vs. image space, RAS vs. LPI …')
 
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**Topics for background tutorials:
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=== Tutorial Topics ===
**the main components: transform, similarity function, optimization, interpolation
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*the main components: transform, similarity function, optimization, interpolation
**coordinate systems: physical vs. image space, RAS vs. LPI etc.  
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*coordinate systems: physical vs. image space, RAS vs. LPI etc.  
**relevant image meta-data: image/axis orientation, image/CS origin, voxel size, dynamic range
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*relevant image meta-data: image/axis orientation, image/CS origin, voxel size, dynamic range
**overview of scenarios and their different challenges: image pairings, DOF, multi-modal, intra/inter-subject etc.
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*overview of scenarios and their different challenges: image pairings, DOF, multi-modal, intra/inter-subject etc.
**how to evaluate a match: tools & concepts
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*how to evaluate a match: tools & concepts
**common mistakes to avoid:  inappropriate DOF, overly flat similarity metric, CS inconsistencies, FOV discrepancies, wrong interpolation, insufficient search (sample points, multi-scale, DOF scale-space)
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*common mistakes to avoid:  inappropriate DOF, overly flat similarity metric, CS inconsistencies, FOV discrepancies, wrong interpolation, insufficient search (sample points, multi-scale, DOF scale-space)
**Troubleshooting guide: insufficient match - what next?  Parameter modification, DOF change, initial alignment assist, fiducial help, ROI masking (e.g. skull stripping)
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*Troubleshooting guide: insufficient match - what next?  Parameter modification, DOF change, initial alignment assist, fiducial help, ROI masking (e.g. skull stripping)
*Tutorial Resources
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**Coordinate Systems / Image Orientation
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===Coordinate Systems / Image Orientation===
 
***http://www.na-mic.org/Wiki/index.php/NA-MIC/Projects/NA-MIC_Kit/Coordinate_Systems
 
***http://www.na-mic.org/Wiki/index.php/NA-MIC/Projects/NA-MIC_Kit/Coordinate_Systems
 
***http://www.na-mic.org/Wiki/index.php/Execution_Model_Reference_Systems
 
***http://www.na-mic.org/Wiki/index.php/Execution_Model_Reference_Systems
 
***http://mail.scipy.org/pipermail/nipy-devel/2009-July/001699.html
 
***http://mail.scipy.org/pipermail/nipy-devel/2009-July/001699.html
 
*** http://www.itk.org/ITK/applications/MutualInfo.html
 
*** http://www.itk.org/ITK/applications/MutualInfo.html

Revision as of 16:15, 24 November 2009

Home < Projects:RegistrationDocumentation:DocumentationResources

Tutorial Topics

  • the main components: transform, similarity function, optimization, interpolation
  • coordinate systems: physical vs. image space, RAS vs. LPI etc.
  • relevant image meta-data: image/axis orientation, image/CS origin, voxel size, dynamic range
  • overview of scenarios and their different challenges: image pairings, DOF, multi-modal, intra/inter-subject etc.
  • how to evaluate a match: tools & concepts
  • common mistakes to avoid: inappropriate DOF, overly flat similarity metric, CS inconsistencies, FOV discrepancies, wrong interpolation, insufficient search (sample points, multi-scale, DOF scale-space)
  • Troubleshooting guide: insufficient match - what next? Parameter modification, DOF change, initial alignment assist, fiducial help, ROI masking (e.g. skull stripping)

Coordinate Systems / Image Orientation