Projects:RegistrationLibrary:RegLib C16

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Slicer Registration Library Case #16: Manual alignment of intra-subject Brain MRI

this is the fixed reference image. All images are aligned into this space lleft this is the moving image. The transform is calculated by matching this to the reference image LEGEND

lleft this indicates the reference image that is fixed and does not move. All other images are aligned into this space and resolution
lleft this indicates the moving image that determines the registration transform.

lleft T1 SPGR lleft T1 SPGR
0.9375 x 0.9375 x 1.4 mm
256 x 256 x 112
RAS
0.9375 x 0.9375 x 1.2 mm
256 x 256 x 130
RAS

Objective / Background

This is a classic case of change assessment. We want to know if the tumor changed since last exam.

Keywords

MRI, brain, head, intra-subject, FLAIR, T1, defacing

Input Data

  • Button red fixed white.jpgreference/fixed : T1 SPGR , 1x1x1 mm voxel size, sagittal, RAS orientation.
  • Button green moving white.jpg moving: T2 FLAIR 1.2x1.2x1.2 mm voxel size, sagittal, RAS orientation.

Registration Results

after orientation
before/after registration, indiv. images in red/cyan, match in gray

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