Difference between revisions of "ProstateNavigation workflow"

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<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
 
* Create mockup GUI
 
* Create mockup GUI
* Try to use existing segmentation modules like [http://www.slicer.org/slicerWiki/index.php/Modules:RobustStatisticsSeg-Documentation-3.6 Robust Statistics Segmenter] or [https://www.youtube.com/watch?v=1mYNwJbE7dQ VolumeClip] for quicker prostate segmentation
+
* Try to use existing segmentation modules like [https://www.slicer.org/wiki/Modules:RobustStatisticsSeg-Documentation-3.6 Robust Statistics Segmenter] or [https://www.youtube.com/watch?v=1mYNwJbE7dQ VolumeClip] for quicker prostate segmentation
 
* Evaluate the segmentation results (DICE-Coefficient) by comparing to manual segmentation of trained radiologists using [http://www.spl.harvard.edu/publications/item/view/2174 this] dataset  
 
* Evaluate the segmentation results (DICE-Coefficient) by comparing to manual segmentation of trained radiologists using [http://www.spl.harvard.edu/publications/item/view/2174 this] dataset  
 
* Evaluate pre-op to intra-op registration with General Registration (BRAINS) module in Slicer 4.4
 
* Evaluate pre-op to intra-op registration with General Registration (BRAINS) module in Slicer 4.4

Latest revision as of 18:07, 10 July 2017

Home < ProstateNavigation workflow

Key Investigators

Peter Behringer, Andrey Fedorov, Hans Johnson

Project Description

Objective

  • Design an easy to use GUI for ProstateNavigation (Planning, Registration, Navigation)
  • Get ideas how prostate segmentation can be done quicker, fully automatic in best case
  • Validate different pre-op to intra-op registration approaches

Approach, Plan

  • Create mockup GUI
  • Try to use existing segmentation modules like Robust Statistics Segmenter or VolumeClip for quicker prostate segmentation
  • Evaluate the segmentation results (DICE-Coefficient) by comparing to manual segmentation of trained radiologists using this dataset
  • Evaluate pre-op to intra-op registration with General Registration (BRAINS) module in Slicer 4.4

Progress