RSNA2009.DevelopersLog

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Updates

• 11/20 Jeff and Wendy met and modified tutorial plan for 11/23 and for RSNA. Need some slides from Jeff to support new presentation plan. Over the weekend, Jeff will edit those slides and Wendy will modify RECIST tutorial. Wendy will combine all slides when she gets Jeff's contrib and will share the final set. We'll meet together directly after the 11/23 session to work on RSNA tutorials.
• 11/20 Jeff, please edit this subset of slides and send back asap. I will integrate them into the presentations for 11/23 and for RSNA.

11/23 Workshop Outline & Storyboard

• 11/23 tutorial contents:
  • Intro by Randy
  • Slicer3Minute by Wendy
  • RECIST intro by Jeff
  • SlicerRECIST by Wendy
  • Optional comments by Jeff
  • ChangeTracker by Wendy
  • PETCT intro by Jeff
  • SlicerPETCT tutorial by Wendy
  • Randy closing and acknowledgments.

RSNA Workshop Outline & Storyboard

Tutorial contents:

• Welcome (Randy Gollub)
• 10:30 AM (Kasia Macura): Overview of imaging biomarkers and their use in clinical trials
• 10:45 AM (Randy Gollub): Generic principles of image registration, segmentation, visualization (technical aspects)
• 11:00 AM (Jeff Yap, Wendy Plesniak):
  • Requirements for standardized acquisition in multi-center trials (e.g. RSNA QIBA)
  • Intro and hands-on interactive demo for each of the imaging biomarkers and
  • Hands-On: Getting familiar with Slicer (Slicer3Minute, Wendy -- 10 minutes)
  • RECIST intro by Jeff
  • Hands-On: Volumetric MR analysis: tumor growth analysis and measurements (SlicerRECIST tutorial, and ChangeTracker tutorial, Wendy, Jeff -- 15 minutes)
  • PETCT intro by Jeff
  • Hands-On: FDG-PET/CT (pre/post-therapy whole-body imaging with SUV quantification) (SlicerPETCT tutorial, Wendy, Jeff -- 10 minutes)
  • DCE-MRI intro by Jeff
  • DCE-MRI (slides, Wendy -- 5 minutes)
  • Randy closing and acknowledgments.

Tutorial Slides

Slicer "3 Minute" Tutorial

Slicer Volumetric Tumor Change Analysis Tutorial Slides

Slicer PET/CT Quantitative Analysis Tutorial Slides

Updates

11/22 - Slides updated: combined RECIST and ChangeTracker into one tutorial. Created new dataset for RECIST part.

Data updated again on 11/8 -- changes made to PETCTFusion-Tutorial after some input from Ron. Changes also made to RECIST tutorial to integrate Compare View.

Data last updated on 11/6 -- changes made to PETCTFusion-Tutorial-Scene.mrml so initial display of data is better. (No changes to datasets included in scene have been made.) -(wjp)

Tutorial Testing

11-8-09 Some changes have been made to the PETCT and RECIST scene files and I've been testing the tutorials over the weekend... plan to complete testing before 9AM monday (wjp)

11-6-09. All tutorials and datasets load and run in Windows RSNA build (generated 11-04-2009). (Stuart W.)

Software

11/2/09 - An svn branch "Slicer3.5-RSNAWorkshop" has been created to keep a more stable implementation aside from the trunk for RSNA. The module is checked in to this branch, and into Slicer's trunk, so it's available as of 11/3 in the nightly build. The nightly build can be used to test this tutorial.

11/6/09 - SVN branch has been updated to include some logic changes, and body weight qualifier to SUV labels (SUVbw). We should include these changes in the binaries for workshops.

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