Difference between revisions of "RSNA2009.DevelopersLog"

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== Updates ==
 
== Updates ==
−
* 11/20 Jeff and Wendy met and modified tutorial plan for 11/23 and for RSNA. Need some slides from Jeff to support new presentation plan. Over the weekend, Jeff will make those slides and Wendy will modify RECIST tutorial. Wendy will combine all slides when she gets Jeff's contrib and will share the final set. We'll meet together directly after the 11/23 session to work on RSNA tutorials.
+
* 11/23 - Combined all tutorials into one master for presentation purposes. Also made a few edits in the combination that will need to be propagated back into the individual tutorials (after 11/23 workshop).
 +
* 11/22 - Slides updated: combined RECIST and ChangeTracker into one tutorial. Created new dataset for RECIST part.
 +
* 11/20 Jeff and Wendy met and modified tutorial plan for 11/23 and for RSNA. Need some slides from Jeff to support new presentation plan. Over the weekend, Jeff will edit those slides and Wendy will modify RECIST tutorial. Wendy will combine all slides when she gets Jeff's contrib and will share the final set. We'll meet together directly after the 11/23 session to work on RSNA tutorials.  
 +
* 11/20 Jeff, please edit [[media:RSNA2009Exerpts.ppt | this subset of slides ]] and send back asap. I will integrate them into the presentations for 11/23 and for RSNA.
 +
* Data updated again on 11/8 -- changes made to PETCTFusion-Tutorial after some input from Ron. Changes also made to RECIST tutorial to integrate Compare View.
 +
* 11-8-09  Some changes have been made to the PETCT and RECIST scene files and I've been testing the tutorials over the weekend... plan to complete testing before 9AM monday (wjp)
 +
* Data last updated on 11/6 -- changes made to PETCTFusion-Tutorial-Scene.mrml so initial display of data is better. (No changes to datasets included in scene have been made.) -(wjp)
 +
* 11/6/09 - SVN branch has been updated to include some logic changes, and body weight qualifier to SUV labels (SUVbw). We should include these changes in the binaries for workshops.
 +
* 11-6-09. All tutorials and datasets load and run in Windows RSNA build (generated 11-04-2009). (Stuart W.)
 +
* 11/2/09 - An svn branch "Slicer3.5-RSNAWorkshop" has been created to keep a more stable implementation aside from the trunk for RSNA. The module is checked in to this branch, and into Slicer's trunk, so it's available as of 11/3 in the nightly build. The nightly build can be used to test this tutorial.
 +
 
 +
==Tutorial Slides==
 +
[[media:Combined-RSNA09-WJP.ppt | Slicer combined presentation ]]
 +
 
 +
[[media:Slicer3Minute-WJP-RSNA09-Guided.ppt | Slicer "3 Minute" Tutorial]]
 +
 
 +
[[media:SlicerVolumetric-WJP-RSNA09-Guided.ppt | Slicer Volumetric Tumor Change Analysis Tutorial Slides]]
 +
 
 +
[[media:PETCTFusion-WJP-RSNA09-Guided.ppt | Slicer PET/CT Quantitative Analysis Tutorial Slides]]
  
 
== 11/23 Workshop Outline & Storyboard ==
 
== 11/23 Workshop Outline & Storyboard ==
Line 9: Line 27:
 
** Slicer3Minute by Wendy
 
** Slicer3Minute by Wendy
 
** RECIST intro by Jeff
 
** RECIST intro by Jeff
−
** SlicerRECIST by Wendy
+
** SlicerRECIST + ChangeTracker by Wendy; Jeff comments on RECIST assessments
−
** Optional comments by Jeff
 
−
** ChangeTracker by Wendy
 
 
** PETCT intro by Jeff
 
** PETCT intro by Jeff
 
** SlicerPETCT tutorial by Wendy
 
** SlicerPETCT tutorial by Wendy
 
** Randy closing and acknowledgments.
 
** Randy closing and acknowledgments.
  
−
[[image:CTSCWorkshopStoryboard.png ]]
+
[[image:CTSCWorkshopStoryboard.png | thumb | 200px | left ]]
  
 
== RSNA Workshop Outline & Storyboard ==
 
== RSNA Workshop Outline & Storyboard ==
  
 
Tutorial contents:
 
Tutorial contents:
 +
* Welcome (Randy Gollub)
 
* 10:30 AM (Kasia Macura): Overview of imaging biomarkers and their use in clinical trials
 
* 10:30 AM (Kasia Macura): Overview of imaging biomarkers and their use in clinical trials
 
* 10:45 AM (Randy Gollub): Generic principles of image registration, segmentation, visualization (technical aspects)
 
* 10:45 AM (Randy Gollub): Generic principles of image registration, segmentation, visualization (technical aspects)
−
* 11:00 AM (Jeff Yap, Wendy Plesniak): Description and hands-on interactive demo for each of the imaging biomarkers and requirements for standardized acquisition in multi-center trials (e.g. RSNA QIBA)
+
* 11:00 AM (Jeff Yap, Wendy Plesniak):
−
** Hands-On: Getting familiar with Slicer (Slicer3Minute, Wendy)
+
** Requirements for standardized acquisition in multi-center trials (e.g. RSNA QIBA)
−
** Hands-On: Volumetric MR analysis: tumor growth analysis and measurements (SlicerRECIST tutorial, and ChangeTracker tutorial, Wendy, comments by Jeff)
+
** Intro and hands-on interactive demo for each of the imaging biomarkers and
−
** Hands-On: FDG-PET/CT (pre/post-therapy whole-body imaging with SUV quantification) (SlicerPETCT tutorial, Wendy, comments by Jeff)
+
** Hands-On: Getting familiar with Slicer (Slicer3Minute, Wendy -- '''10 minutes''')
−
** DCE-MRI (slides, Wendy, comments by Jeff)
+
** RECIST intro by Jeff
 +
** Hands-On: Volumetric MR analysis: tumor growth analysis and measurements (SlicerRECIST + ChangeTracker tutorial, Wendy, Jeff -- '''15 minutes''')
 +
** PETCT intro by Jeff
 +
** Hands-On: FDG-PET/CT (pre/post-therapy whole-body imaging with SUV quantification) (SlicerPETCT tutorial, Wendy, Jeff -- '''10 minutes''')
 +
** DCE-MRI intro by Jeff
 +
** DCE-MRI (slides, Wendy -- '''5 minutes''')
 
** Randy closing and acknowledgments.
 
** Randy closing and acknowledgments.
  
−
[[image:RSNACTSAWorkshopStoryboard.png ]]
+
[[image:RSNACTSAWorkshopStoryboard.png | thumb | 200px | left ]]
−
 
 
−
==Tutorial Slides==
 
−
[[media:PETCTFusion.ppt | PET/CT Fusion in Slicer3.5 DRAFT Tutorial Slides ]]
 
−
 
 
−
[[media:RECIST-Tutorial.ppt | RECIST in Slicer3.5 DRAFT Tutorial Slides ]]
 
−
 
 
−
[[media:Slicer3.5RSNA-RECIST-Simple.ppt | RECIST in Slicer3.5 DRAFT Simple Tutorial Slides ]]
 
−
 
 
−
[http://www.slicer.org/slicerWiki/images/4/4d/Slicer3.4.1-ChangeTrackerTutorial.pdf ChangeTracker Tutorial Slides ]
 
−
 
 
−
 
 
−
===Updates===
 
−
Data updated again on 11/8 -- changes made to PETCTFusion-Tutorial after some input from Ron. Changes also made to RECIST tutorial to integrate Compare View.
 
−
 
 
−
Data last updated on 11/6 -- changes made to PETCTFusion-Tutorial-Scene.mrml so initial display of data is better. (No changes to datasets included in scene have been made.) -(wjp)
 
−
 
 
−
==Tutorial Testing==
 
−
11-8-09  Some changes have been made to the PETCT and RECIST scene files and I've been testing the tutorials over the weekend... plan to complete testing before 9AM monday (wjp)
 
−
 
 
−
11-6-09. All tutorials and datasets load and run in Windows RSNA build (generated 11-04-2009). (Stuart W.)
 
−
 
 
−
==Software==
 
−
 
 
−
11/2/09 - An svn branch "Slicer3.5-RSNAWorkshop" has been created to keep a more stable implementation aside from the trunk for RSNA. The module is checked in to this branch, and into Slicer's trunk, so it's available as of 11/3 in the nightly build. The nightly build can be used to test this tutorial.
 
−
 
 
−
11/6/09 - SVN branch has been updated to include some logic changes, and body weight qualifier to SUV labels (SUVbw). We should include these changes in the binaries for workshops.
 
  
  
 
Return to [[Events:RSNA_CTSA_2009]]
 
Return to [[Events:RSNA_CTSA_2009]]

Latest revision as of 15:22, 23 November 2009

Home < RSNA2009.DevelopersLog

Back to RSNA2009

Updates

  • 11/23 - Combined all tutorials into one master for presentation purposes. Also made a few edits in the combination that will need to be propagated back into the individual tutorials (after 11/23 workshop).
  • 11/22 - Slides updated: combined RECIST and ChangeTracker into one tutorial. Created new dataset for RECIST part.
  • 11/20 Jeff and Wendy met and modified tutorial plan for 11/23 and for RSNA. Need some slides from Jeff to support new presentation plan. Over the weekend, Jeff will edit those slides and Wendy will modify RECIST tutorial. Wendy will combine all slides when she gets Jeff's contrib and will share the final set. We'll meet together directly after the 11/23 session to work on RSNA tutorials.
  • 11/20 Jeff, please edit this subset of slides and send back asap. I will integrate them into the presentations for 11/23 and for RSNA.
  • Data updated again on 11/8 -- changes made to PETCTFusion-Tutorial after some input from Ron. Changes also made to RECIST tutorial to integrate Compare View.
  • 11-8-09 Some changes have been made to the PETCT and RECIST scene files and I've been testing the tutorials over the weekend... plan to complete testing before 9AM monday (wjp)
  • Data last updated on 11/6 -- changes made to PETCTFusion-Tutorial-Scene.mrml so initial display of data is better. (No changes to datasets included in scene have been made.) -(wjp)
  • 11/6/09 - SVN branch has been updated to include some logic changes, and body weight qualifier to SUV labels (SUVbw). We should include these changes in the binaries for workshops.
  • 11-6-09. All tutorials and datasets load and run in Windows RSNA build (generated 11-04-2009). (Stuart W.)
  • 11/2/09 - An svn branch "Slicer3.5-RSNAWorkshop" has been created to keep a more stable implementation aside from the trunk for RSNA. The module is checked in to this branch, and into Slicer's trunk, so it's available as of 11/3 in the nightly build. The nightly build can be used to test this tutorial.

Tutorial Slides

Slicer combined presentation

Slicer "3 Minute" Tutorial

Slicer Volumetric Tumor Change Analysis Tutorial Slides

Slicer PET/CT Quantitative Analysis Tutorial Slides

11/23 Workshop Outline & Storyboard

  • 11/23 tutorial contents:
    • Intro by Randy
    • Slicer3Minute by Wendy
    • RECIST intro by Jeff
    • SlicerRECIST + ChangeTracker by Wendy; Jeff comments on RECIST assessments
    • PETCT intro by Jeff
    • SlicerPETCT tutorial by Wendy
    • Randy closing and acknowledgments.
CTSCWorkshopStoryboard.png

RSNA Workshop Outline & Storyboard

Tutorial contents:

  • Welcome (Randy Gollub)
  • 10:30 AM (Kasia Macura): Overview of imaging biomarkers and their use in clinical trials
  • 10:45 AM (Randy Gollub): Generic principles of image registration, segmentation, visualization (technical aspects)
  • 11:00 AM (Jeff Yap, Wendy Plesniak):
    • Requirements for standardized acquisition in multi-center trials (e.g. RSNA QIBA)
    • Intro and hands-on interactive demo for each of the imaging biomarkers and
    • Hands-On: Getting familiar with Slicer (Slicer3Minute, Wendy -- 10 minutes)
    • RECIST intro by Jeff
    • Hands-On: Volumetric MR analysis: tumor growth analysis and measurements (SlicerRECIST + ChangeTracker tutorial, Wendy, Jeff -- 15 minutes)
    • PETCT intro by Jeff
    • Hands-On: FDG-PET/CT (pre/post-therapy whole-body imaging with SUV quantification) (SlicerPETCT tutorial, Wendy, Jeff -- 10 minutes)
    • DCE-MRI intro by Jeff
    • DCE-MRI (slides, Wendy -- 5 minutes)
    • Randy closing and acknowledgments.
RSNACTSAWorkshopStoryboard.png


Return to Events:RSNA_CTSA_2009

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