Difference between revisions of "Slicer4 Diffusion tutorial"
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Feb.14 Diffusion meeting - Sonia's reports on the DTI modules of the current Slicer4 release: | Feb.14 Diffusion meeting - Sonia's reports on the DTI modules of the current Slicer4 release: | ||
| − | * | + | * Mantis Bug Reports: |
| − | |||
** [http://www.na-mic.org/Bug/view.php?id=1722 Brain Mask] (assigned to Demian) | ** [http://www.na-mic.org/Bug/view.php?id=1722 Brain Mask] (assigned to Demian) | ||
** [http://www.na-mic.org/Bug/view.php?id=1679 Color by Orientation] (assigned to Demian) | ** [http://www.na-mic.org/Bug/view.php?id=1679 Color by Orientation] (assigned to Demian) | ||
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* DicomToNrrdConverter should be DICOM To NRRD Converter, and make the parameters of the Output sections visible on the GUI (assigned to Demian) | * DicomToNrrdConverter should be DICOM To NRRD Converter, and make the parameters of the Output sections visible on the GUI (assigned to Demian) | ||
| − | * Scalar Measurement computation issue (Planar measure): wrong window and level values in the Volumes module ( assigned to Julien Finet) | + | * Scalar Measurement computation issue (Planar measure): wrong window and level values in the Volumes module ( assigned to Julien Finet) iss due to extreme values in the data - can this be clamped in the scalar estimation module? |
* Slicer crashes when saving the DTI tutorial Scene on Mac (assigned to Steve) | * Slicer crashes when saving the DTI tutorial Scene on Mac (assigned to Steve) | ||
* Tutorial dataset: [[media:DiffusionMRI_tutorialData.zip| Slicer4 DTI dataset]] | * Tutorial dataset: [[media:DiffusionMRI_tutorialData.zip| Slicer4 DTI dataset]] | ||
| + | * '''Suggested dead-line March 12, 2012''' ( preparation for the Iowa Workshop March 20-21) | ||
Revision as of 21:30, 14 February 2012
Home < Slicer4 Diffusion tutorialFeb.14 Diffusion meeting - Sonia's reports on the DTI modules of the current Slicer4 release:
- Mantis Bug Reports:
- Brain Mask (assigned to Demian)
- Color by Orientation (assigned to Demian)
- Glyphs Visualization (assigned to Alex)
- Fiducials Seeding (assigned to Alex)
- Consistency of the GUI in the labelmap and fiducial seeding modules (assigned to Alex)
- Suggested Reorganization of the Diffusion menu (assigned to Demian)
- Diffusion Data Conversion:
- DICOM to Nrrd
- DTIimport/export
- DWI:
- Brain Mask
- Tensor Estimation
- Denoising
- DTI
- Scalar Measurements
- Tractography
- Resample
- Diffusion Data Conversion:
- DicomToNrrdConverter should be DICOM To NRRD Converter, and make the parameters of the Output sections visible on the GUI (assigned to Demian)
- Scalar Measurement computation issue (Planar measure): wrong window and level values in the Volumes module ( assigned to Julien Finet) iss due to extreme values in the data - can this be clamped in the scalar estimation module?
- Slicer crashes when saving the DTI tutorial Scene on Mac (assigned to Steve)
- Tutorial dataset: Slicer4 DTI dataset
- Suggested dead-line March 12, 2012 ( preparation for the Iowa Workshop March 20-21)
