Difference between revisions of "Slicer:Workshops:User Training 101"
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= Slicer Additional Resources = | = Slicer Additional Resources = | ||
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| + | [[Image:101.png|thumb|left|250px|Excerpts from the Slicer 101 courses: Diffusion Tensor Imaging fiber tractography (top); fMRI activation map (lower-left); automatic brain segmentation (lower-right).]] | ||
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* [[Slicer:Feedback|Feedback about Slicer]] | * [[Slicer:Feedback|Feedback about Slicer]] | ||
Revision as of 13:28, 31 May 2007
Home < Slicer:Workshops:User Training 101This is the introductory Slicer 2.6 training material.
Contents
Introduction
You can begin to learn how to
- load and view data
- segment data and create 3D models
- use the DTI and fMRI modules
For an overview, dowload this slideshow
Software Installation
Please install the following software applications and files from the NAMIC site before the course: the current version of the Slicer program appropriate to your platform, the tutorial guide for Slicer, the generic sample data set. This material is located in Slicer 2.6 Getting Started: Software & Sample Data .
Slicer 2 Materials
| Contents | Presentation | Data | |
| Slicer | |||
| Loading and Viewing Data | |||
| Manual Segmentation and Model Making | |||
| Level-Set Segmentation | |||
| Diffusion Tensor Imaging | |||
| Functional Magnetic Resonance Imaging | |||
| vtkFreeSurferReaders | |||
| Saving Data | |||
| Nrrd File Format | |||
| Dicom to Nrrd Conversion | |||
| EMBrainAtlasClassifier | |||
| Registration | |||
| fMRI Statistical Analysis |
|
Slicer Additional Resources
- SPL PNL Brain Atlas
- IGT Tutorial Materials
- EMSegmenter for multi-channel data and white matter hyperintensities
- Data Fusion and Registration
- Using 3DSlicer in Astronomy
- How to use Slicer with BIRN
- CT based atlas of the abdomen. This data is organized in analogy to the brain atlas above. The zip archive contains a .txt file with the key for the label values and their anatomical meaning.
Feedback and Bug reports
Acknowledgements
- Slicer is being developed by a community of contributors. For more information see the Slicer website.
Back to Training:Main
