Difference between revisions of "Measuring Alcohol Stress Interaction"
From NAMIC Wiki
Line 43: | Line 43: | ||
* [http://www.na-mic.org/Wiki/index.php/NA-MIC_NCBC_Collaboration:Measuring_Alcohol_and_Stress_Interaction NA-MIC NCBC Collaboration: Measuring alcohol and stress interaction] | * [http://www.na-mic.org/Wiki/index.php/NA-MIC_NCBC_Collaboration:Measuring_Alcohol_and_Stress_Interaction NA-MIC NCBC Collaboration: Measuring alcohol and stress interaction] | ||
* [http://wiki.na-mic.org/Wiki/index.php/EMSegment EM Segment project by Sylvain Jaume and Nicolas Rannou] | * [http://wiki.na-mic.org/Wiki/index.php/EMSegment EM Segment project by Sylvain Jaume and Nicolas Rannou] | ||
− | + | * Tustison N., Gee J. "N4ITK: Nick's N3 ITK Implementation For MRI Bias Field Correction" InsightJournal, 2009 January - June, [http://www.insight-journal.org/browse/publication/640] |
Revision as of 19:57, 17 June 2009
Home < Measuring Alcohol Stress Interaction
Key Investigators
- VT: Chris Wyatt, Vidya Rajagopalan
- BWH: Andrey Fedorov, Ron Kikinis, Nicolas Rannou, Sylvain Jaume
Objective
- To improve cortical segmentation of Vervet segmentation Results
- Use Change tracker module in Slicer to study hippocampal changes between subjects at two time points
Approach, Plan
- Improve rigid registration results by optimizing parameters
- Add bias correction to workflow to improve segmentation results
- Study hippocampal changes between subjects at two time points using Change Tracker
Progress
- ChangeTracker augmented with the capability to accept externally-defined segmentation (ChangeTrackerVT in NAMIC Sandbox)
- MRIBiasCorrection module by Nicolas Rannou available in NAMIC SandBox, initial testing on rhesus data done
- GWE set up on SPL Cluster for registration parameter exploration
References
- NA-MIC NCBC Collaboration: Measuring alcohol and stress interaction
- EM Segment project by Sylvain Jaume and Nicolas Rannou
- Tustison N., Gee J. "N4ITK: Nick's N3 ITK Implementation For MRI Bias Field Correction" InsightJournal, 2009 January - June, [1]