Difference between revisions of "2013 Project Week:QualityAssuranceModule"
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<gallery> | <gallery> | ||
Image:PW-SLC2013.png|[[2013_Winter_Project_Week#Projects|Projects List]] | Image:PW-SLC2013.png|[[2013_Winter_Project_Week#Projects|Projects List]] | ||
| − | Image: | + | Image:QAModule_derived.png| Derived Images QA module |
| + | Image:QAModule_rawDWI.png| Raw DWI QA module | ||
| + | Image:QAModule_postDWI.png| Processed DWI QA module | ||
| + | Image:QAModule_db.png| PostgresSQL database | ||
</gallery> | </gallery> | ||
==Key Investigators== | ==Key Investigators== | ||
| − | * | + | * Dave Welch, University of Iowa SINAPSE |
| − | * | + | * Hans Johnson, University of Iowa SINAPSE |
| − | |||
==Project Description== | ==Project Description== | ||
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<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | * We | + | * We have created several Python-based image quality assurance modules for use by research technicians in our lab. Our goals with this project are: |
| − | + | # Refactoring to enable more flexible extension of the modules | |
| + | # Implementation of several user requests, such as hotkeys | ||
| + | # Improved interaction with our database for increased robustness | ||
| + | # Expanded testing and logging | ||
| + | # Documentation and examples on Slicer Wiki | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | * | + | * Implement a test database on-the-fly |
| − | * | + | * Expand test code coverage (doctests, unittests via nose) |
| − | * | + | * Add logging |
| + | * Decouple module code from DB interaction | ||
| + | * Refactor and consolidate code from our three modules | ||
| + | * Improve GUI and MRML interactions | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | * | + | * This is a continuation of [[2012_Summer_Project_Week:Evaluation_Module]] |
| + | |||
| + | ==== Database interface ==== | ||
| + | * Implemented in-memory testing database on-the-fly (SQLite) | ||
| + | * Added extensive testing and logging | ||
| + | * Supports <em>both</em> Postgres and SQLite | ||
| + | * Refactored to support all three existing modules | ||
| + | * Implemented file-based configuration for customization | ||
| + | |||
| + | ==== GUI ==== | ||
| + | * (in progress) GUI construction via configuration file | ||
| + | |||
| + | ==== MRML ==== | ||
| + | * (in progress) code refactoring for generalization | ||
| + | * (in progress) GUI-MRML coupling via configuration file | ||
| + | |||
| + | ==== Additional ==== | ||
| + | * Improved Python structure and packaging | ||
| + | * (in progress) Improved documentation of module | ||
</div> | </div> | ||
</div> | </div> | ||
Latest revision as of 15:38, 11 January 2013
Home < 2013 Project Week:QualityAssuranceModule
Derived Images QA module
Raw DWI QA module
Processed DWI QA module
PostgresSQL database
Key Investigators
- Dave Welch, University of Iowa SINAPSE
- Hans Johnson, University of Iowa SINAPSE
Project Description
Objective
- We have created several Python-based image quality assurance modules for use by research technicians in our lab. Our goals with this project are:
- Refactoring to enable more flexible extension of the modules
- Implementation of several user requests, such as hotkeys
- Improved interaction with our database for increased robustness
- Expanded testing and logging
- Documentation and examples on Slicer Wiki
Approach, Plan
- Implement a test database on-the-fly
- Expand test code coverage (doctests, unittests via nose)
- Add logging
- Decouple module code from DB interaction
- Refactor and consolidate code from our three modules
- Improve GUI and MRML interactions
Progress
- This is a continuation of 2012_Summer_Project_Week:Evaluation_Module
Database interface
- Implemented in-memory testing database on-the-fly (SQLite)
- Added extensive testing and logging
- Supports both Postgres and SQLite
- Refactored to support all three existing modules
- Implemented file-based configuration for customization
GUI
- (in progress) GUI construction via configuration file
MRML
- (in progress) code refactoring for generalization
- (in progress) GUI-MRML coupling via configuration file
Additional
- Improved Python structure and packaging
- (in progress) Improved documentation of module
