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M==Course Title==

776px-Flyer SlicerWorkshop August2009.png

Introduction to Opensource Software Slicer and its Application to Image-Guided Therapy

Course Syllabus

The purpose of this tutorial is to provide the members of the research community with a practical experience of the image processing, 3D visualization, and Image-Guided Therapy capabilities of the Open Source 3D Slicer software platform. The curriculum is hands-on which means that participants are required to attend the workshop with a suitable laptop, preloaded with the software and sample data as specified below. Attendance is limited in order to ensure quality interactions between the faculty and participants.

講師

  • 波多伸彦

Surgical Planning Laboratory, Brigham and Women's Hospital, Boston MA

  • 徳田淳一

Surgical Planning Laboratory, Brigham and Women's Hospital, Boston MA

Logistics

  • 日時:2010年3月16日(火曜日)
  • Time: 9am - 4pm
  • Location: 東京女子医大
  • 参加者は各自のノートブックパソコンにSlicerをダウンロードしてコンパイルできる方に限ります。医師、研修医、医歯薬、理工学大学院生を対象としてカリキュラムは組まれています。
  • 参加希望者はhata@bwh.harvard.eduまで名前、所属、使用パソコンのOSをお送りください。

講義シラバス

Morning: Introduction to Slicer

  1. Loading and visualizing anatomical MRI data
  2. Incorporating fMRI data using image registration and thresholding
  3. Creating a 3D model of the tumour volume
  • 11:30 am - 12:00 pm Discussion and Conclusion
  • 12:00 -1pm Lunch Break

Afternoon: Introduction to Slicer IGT

  1. Predicting the locations of brain structures using image registration and a brain atlas
  2. Incorporating brain fiber tractography from diffusion weighted images
  3. Annotating the preoperative plan and saving the scene
  • 3:30 - 4:45 pm Coffee-break
    • Slicerを用いた研究モジュールの作り方(徳田淳一)
    • Slicerによる産学連携(Aze)

参加準備

Please complete the following items prior to the course. Support will be provided as requested

  • Software Installation: Please install the newest Slicer3.4 release appropriate to the computer you will be bringing to the workshop:
    • Windows: Slicer3-3.4-2009-05-21-win32.exe
    • Mac OSX Darwin PPC: Slicer3-3.4.2009-05-21-darwin-ppc.tar.gz
    • Mac OSX Darwin Intel: Slicer3-3.4.2009-05-21-darwin-x86.tar.gz
    • Linux x86: Slicer3-3.4.2009-05-21-linux-x86.tar.gz
    • Linux x86-64: Slicer3-3.4.2009-05-21-linux-x86_64.tar.gz

The instructions for installing the Slicer3 program describe the different steps of the procedure on Mac OS, Linux and Windows.

Recommended configuration: Windows XP, Linux (x86 or x86_64), Mac OS (ppc or Intel), 2 GB of RAM and a dedicated graphic accelerator with 128 MB of on board graphic memory.


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