Projects:ARRA:SlicerEM Meeting 07202010
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Purpose
- Address question related to EMSegmentLogic
Attendants
- Kilian Pohl
- Sebastien Barre
- Jean-Christophe Fillion-Robin
- Julien Finet
Questions
- vtkSlicerEMSegmentLogic - Old vs New pipeline
What the status regarding the two sets of methods ?
- ComputeIntensityDistributionsFromSpatialPrior / UpdateIntensityDistributionAuto
int numTargetImages = workingTarget->GetNumberOfVolumes(); // // // Sample // { // vtksys_stl::stringstream CMD ; // CMD << "::EMSegmenterAutoSampleTcl::EMSegmentGaussCurveCalculationFromID " << vtkKWTkUtilities::GetTclNameFromPointer(app->GetMainInterp(), this->MRMLManager) << " 0.95 1 { " ; // for (int i = 0 ; i < numTargetImages; i++) { // CMD << workingTarget->GetNthVolumeNodeID(i) << " " ; // } // CMD << " } " << this->MRMLManager->GetVolumeNode(this->MRMLManager->GetTreeNodeSpatialPriorVolumeID(nodeID))->GetID() << " {" << this->MRMLManager->GetTreeNodeName(nodeID) << "} \n"; // // cout << CMD.str().c_str() << endl; // if (atoi(app->Script(CMD.str().c_str()))) { return; } // } // // // // // propogate data to mrml node // // // // vtkMRMLEMSTreeParametersLeafNode* leafNode = this->MRMLManager->GetTreeNode(nodeID)->GetParametersNode()->GetLeafParametersNode(); // for (int r = 0; r < numTargetImages; ++r) // { // { // double value = atof(app->Script("expr $::EMSegment(GaussCurveCalc,Mean,%d)",r)); // leafNode->SetAutoLogMean(r, value); // } // for (int c = 0; c < numTargetImages; ++c) // { // double value = atof(app->Script("expr $::EMSegment(GaussCurveCalc,Covariance,%d,%d)",r,c)); // leafNode->SetAutoLogCovariance(r, c, value); // } // }