2012 Progress Report Science Wiki Version

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This is where the outline for the 2012 scientific report for NA-MIC goes in. Ann will provide this outline by 4/1.

Assignments: Short version

Reporting Interval: 7/1/2011- 6/30/2012

Task Owner Title, comments
1. INTRODUCTION Ron Update Figure 1-1. Geo-anatomical Map of NA-MIC Collaborations, Recent changes and Center (administrative) highlights
2. HIGHLIGHTS Will Schroeder, Kitware 2.1 Algorithms, 2.2 Engineering, 2.3 NA-MIC Kit.
3. IMPACT AND VALUE TO BIOCOMPUTING Jim Miller, GE 3.1 Impact within the Center, 3.2 Impact within NIH-Funded Research, 3.3 National and International Impact
4. RESEARCH PROGRESS SUMMARIES
4.1 DRIVING BIOLOGICAL PROJECTS DBP PIs
4.1.1 Atrial Fibrillation Rob MacLeod, Utah A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC
4.1.2 Huntington's Disease Hans Johnson, Iowa A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC
4.1.3 Adaptive Radiotherapy for Head and Neck Cancer Gregory C. Sharp, MGH A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC
4.1.4 Traumatic Brain Injury Jack Van Horn, UCLA A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC
5. COMPUTER SCIENCE CORE Ross Whitaker Brief Introduction: Algorithms, Engineering, NA-MIC Kit
5.1 Algorithms Polina Golland, Guido Gerig, Allen Tannenbaum, Martin Styner 5.1.1 Statistical Models of Anatomy and Pathology, Polina Golland
A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC

5.1.2. Geometric Correspondence, Guido Gerig
A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC
5.1.3. User Interactive Segmentation, Allen Tannenbaum
A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC
5.1.4. Longitudinal and Time Series Analysis, Martin Styner
A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC

5.2 Engineering Will Schroeder, Steven Aylward, Steve Pieper, Jim Miller 5.2.1. End-user Platform, Steve Pieper
5.1.2. Computational Platform, Jim Miller
5.1.3. Quality software: Qt and GUI testing
5.1.4. NA-MIC Kit, Expansion and Release
6. ARRA SUPPLEMENT Steve Aylward, Steve Pieper 6.1 Summary of Funded Activity
7. NA-MIC PUBLICATIONS Marianna
8. External Advisory Board (EAB) Report Bill Lorensen