Difference between revisions of "2008 Summer Project Week:EddyCurrentCorrection"
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| + | |[[Image:ProjectWeek-2008.png|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]] | ||
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|[[Image:DTIregistration.png|thumb|512px|Coronal slice from a unregisted DTI (left). The same slice after applying the registration model (right).]] | |[[Image:DTIregistration.png|thumb|512px|Coronal slice from a unregisted DTI (left). The same slice after applying the registration model (right).]] | ||
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| + | __NOTOC__ | ||
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| + | ===Key Investigators=== | ||
| + | * Utah: Ran Tao, Tom Fletcher, Ross Whitaker | ||
| + | * BWH: Sylvain Bouix | ||
| + | * GE: Xiaodong Tao | ||
| + | |||
| + | |||
| + | <div style="margin: 20px;"> | ||
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| + | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
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| + | <h1>Objective</h1> | ||
| + | The objective is to create software for correcting head motion and eddy current artifacts in DWIs. | ||
| + | |||
| + | </div> | ||
| + | |||
| + | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
| + | |||
| + | <h1>Approach, Plan</h1> | ||
| + | We implemented the diffusion weighted image (DWI) registration model from the paper of G.K.Rohde et al. Patient head motion and eddy currents distortion cause artifacts in maps of diffusion parameters computed from DWI. This model corrects these two distortions at the same time including brightness correction. | ||
| + | </div> | ||
| + | |||
| + | <div style="width: 40%; float: left;"> | ||
| + | |||
| + | <h1>Progress</h1> | ||
| + | * We have implemented a simple command line module. We plan to add the gradient rotation, sinc interpolation and to make an easy to use Slicer module. | ||
| + | * An ITK module has been written takes a nrrd dwi in and gives a nrrd dwi back. | ||
| + | * Will follow up with testing and make it a slicer3 command line module | ||
| + | </div> | ||
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| + | <br style="clear: both;" /> | ||
| + | |||
| + | </div> | ||
| + | |||
| + | ===References=== | ||
[1] G.K.Rohde, A.S.Barnett, P.J.Basser, S.Marenco, and C.Pierpaoli, et al., "Comprehensive Approach for Correction of Motion and Distortion in Diffusion-Weighted MRI," Magnetic Resonance in Medicine 51:103-114(2004) | [1] G.K.Rohde, A.S.Barnett, P.J.Basser, S.Marenco, and C.Pierpaoli, et al., "Comprehensive Approach for Correction of Motion and Distortion in Diffusion-Weighted MRI," Magnetic Resonance in Medicine 51:103-114(2004) | ||
Latest revision as of 14:04, 27 June 2008
Home < 2008 Summer Project Week:EddyCurrentCorrection Return to Project Week Main Page |
Key Investigators
- Utah: Ran Tao, Tom Fletcher, Ross Whitaker
- BWH: Sylvain Bouix
- GE: Xiaodong Tao
Objective
The objective is to create software for correcting head motion and eddy current artifacts in DWIs.
Approach, Plan
We implemented the diffusion weighted image (DWI) registration model from the paper of G.K.Rohde et al. Patient head motion and eddy currents distortion cause artifacts in maps of diffusion parameters computed from DWI. This model corrects these two distortions at the same time including brightness correction.
Progress
- We have implemented a simple command line module. We plan to add the gradient rotation, sinc interpolation and to make an easy to use Slicer module.
- An ITK module has been written takes a nrrd dwi in and gives a nrrd dwi back.
- Will follow up with testing and make it a slicer3 command line module
References
[1] G.K.Rohde, A.S.Barnett, P.J.Basser, S.Marenco, and C.Pierpaoli, et al., "Comprehensive Approach for Correction of Motion and Distortion in Diffusion-Weighted MRI," Magnetic Resonance in Medicine 51:103-114(2004)
