Difference between revisions of "2009 Summer Project Week Lupus Lesion Segmentation"

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Image:PW2009-v3.png|[[2009_Summer_Project_Week|Project Week Main Page]]
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Image:lesionManual-PW2009.png|Manual tracing of lupus lesions.
 
Image:lesionManual-PW2009.png|Manual tracing of lupus lesions.
 
Image:lesionHeatMap-PW2009.png|Predicted Heat Map.
 
Image:lesionHeatMap-PW2009.png|Predicted Heat Map.

Revision as of 02:01, 17 June 2009

Home < 2009 Summer Project Week Lupus Lesion Segmentation

Key Investigators

  • MRN: H. Jeremy Bockholt, Mark Scully
  • Isomics: Steve Pieper

Objective

To create an end-to-end Lupus lesion segmentation and analysis pipeline that can work in both an automated and semi-supervised fashion.

See our Roadmap for more details.

Approach, Plan

Our approach involves the combination of morphometric features with a non-linear classifier in order to capture more of the gestalt properties a human rater uses when segmenting Lupus lesions.

Our plan for the project week is to:

  • Work with Steve Pieper to implement the wizard interface to the lesion analysis module to make the segmentation process easier.
  • Integrate the output of the lesion analysis module with change tracker to allow for longitudinal analysis.
  • Refactor the lesion analysis code and integrate it with the Slicer code repository so it is built with Slicer.

Progress


References