Difference between revisions of "2009 Summer Project Week Multimodal SPL Brain Atlas"
From NAMIC Wiki
| Line 5: | Line 5: | ||
==Key Investigators== | ==Key Investigators== | ||
| − | * BWH: Ion-Florin Talos | + | * BWH: Ion-Florin Talos, Michael Halle, Wendy Plesniak |
| − | * | + | * GE: Jim Miller |
| − | |||
| − | |||
<div style="margin: 20px;"> | <div style="margin: 20px;"> | ||
| Line 14: | Line 12: | ||
<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | To | + | To explore ways of linking the image data of the SPL multi-modal brain atlas (label maps, 3D-models) with ontological information on brain morphology and function |
| Line 22: | Line 20: | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | + | ||
| + | * continue work on XML-based intermediate data representation that supports anatomical hierarchies and can describe arbitrary overlapping image regions (e.g. brain functional systems) | ||
| + | * application integration of the new XML-based data representation (3D-Slicer) | ||
==References== | ==References== | ||
| − | + | 1. Talos IF, Rubin DL, Halle M, Musen MA, Kikinis R. A prototype symbolic model of canonical functional neuroanatomy of the motor system. J Biomed Inform. 2008 Apr;41(2):251-263. PMID: 18164666. PMCID: PMC2376098. | |
| + | 2. Rubin DL, Talos IF, Halle M, Musen MA, Kikinis R. Computational neuroanatomy: ontology-based representation of neural components and connectivity. BMC Bioinformatics 2009; 10(Suppl 2):S3. PMID: 19208191. PMCID: PMC2646240. | ||
Revision as of 15:30, 19 June 2009
Home < 2009 Summer Project Week Multimodal SPL Brain Atlas
Key Investigators
- BWH: Ion-Florin Talos, Michael Halle, Wendy Plesniak
- GE: Jim Miller
Objective
To explore ways of linking the image data of the SPL multi-modal brain atlas (label maps, 3D-models) with ontological information on brain morphology and function
Approach, Plan
- continue work on XML-based intermediate data representation that supports anatomical hierarchies and can describe arbitrary overlapping image regions (e.g. brain functional systems)
- application integration of the new XML-based data representation (3D-Slicer)
References
1. Talos IF, Rubin DL, Halle M, Musen MA, Kikinis R. A prototype symbolic model of canonical functional neuroanatomy of the motor system. J Biomed Inform. 2008 Apr;41(2):251-263. PMID: 18164666. PMCID: PMC2376098. 2. Rubin DL, Talos IF, Halle M, Musen MA, Kikinis R. Computational neuroanatomy: ontology-based representation of neural components and connectivity. BMC Bioinformatics 2009; 10(Suppl 2):S3. PMID: 19208191. PMCID: PMC2646240.
