Difference between revisions of "2009 Summer Project Week Slicer3 Brainlab Introduction"

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<gallery>
 
<gallery>
Image:PW2009-v3.png|[[2009_Summer_Project_Week|Project Week Main Page]]
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Image:PW2009-v3.png|[[2009_Summer_Project_Week#Projects|Project Week Main Page]]
 
Image:Slicer_dti_seeding_or.jpg|Slicer3 in OR for fiducial seeding of DTI tractography
 
Image:Slicer_dti_seeding_or.jpg|Slicer3 in OR for fiducial seeding of DTI tractography
 
Image:Slicer_dti_seeding.png|Slicer3 fiducial seeding of DTI tractography
 
Image:Slicer_dti_seeding.png|Slicer3 fiducial seeding of DTI tractography
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==Key Investigators==
 
==Key Investigators==
* BWH: Haiying Liu, Isaiah Norton, Junichi Tokuda, Alex Golby, Noby Hata, Tina Kapur
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* BWH: Haiying Liu, Isaiah Norton, Junichi Tokuda, Alex Golby, Noby Hata, Tina Kapur, Haytham Elhawary
 
* Isomics: Steve Pieper
 
* Isomics: Steve Pieper
 
* Yale: Xenios Papademetris
 
* Yale: Xenios Papademetris
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<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
 
*Slicer3, BioImage Suite and BrainLab will be connected through a router in BWH OR. BioImage Suite will be a "bridge" between Slicer3 and BrainLab for data communication.
 
*Slicer3, BioImage Suite and BrainLab will be connected through a router in BWH OR. BioImage Suite will be a "bridge" between Slicer3 and BrainLab for data communication.
*It's probably a good idea to show step by step how we set up the system. Instructions can also be found here at: http://www.slicer.org/slicerWiki/index.php/Slicer3:BrainLab_Integration
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*It's probably a good idea to show step by step how we set up the system. Instructions can also be found here at: https://www.slicer.org/wiki/Slicer3:BrainLab_Integration
 
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<h3>Progress</h3>
 
<h3>Progress</h3>
The integrated system has been used in BWH OR for 6 neurosurgical cases.
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* Performed demonstration (with great help from Yale team and BrainLab) this week.
 
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* Five participants.
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* Launching BWH-UCLA collaboration based this work.
 
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Latest revision as of 17:23, 10 July 2017

Home < 2009 Summer Project Week Slicer3 Brainlab Introduction

Key Investigators

  • BWH: Haiying Liu, Isaiah Norton, Junichi Tokuda, Alex Golby, Noby Hata, Tina Kapur, Haytham Elhawary
  • Isomics: Steve Pieper
  • Yale: Xenios Papademetris
  • BrainLab: Pratik Patel
  • UCLA: Nathan Hageman

Objective

Introduce and demonstrate how we integrate BrainLab, BioImage Suite and Slicer3 to perform fiducial seeding of DTI tractography in Slicer3.

Approach, Plan

  • Slicer3, BioImage Suite and BrainLab will be connected through a router in BWH OR. BioImage Suite will be a "bridge" between Slicer3 and BrainLab for data communication.
  • It's probably a good idea to show step by step how we set up the system. Instructions can also be found here at: https://www.slicer.org/wiki/Slicer3:BrainLab_Integration

Progress

  • Performed demonstration (with great help from Yale team and BrainLab) this week.
  • Five participants.
  • Launching BWH-UCLA collaboration based this work.