Difference between revisions of "2011 Summer Project Week DTI PairWise Registration"

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<h3>Objective</h3>
 
<h3>Objective</h3>
We are developing a pipeline which performs DTI pair-wise registration. The goal is to create a user-friendly Slicer3 extension which performs such a registration automatically, instead of running Slicer3 modules individually (fiber process, BRAINSFit, BRAINSDemonWarp, ResampleDTI Volume...). Such a wrapper will generate and use scalar features (e.g FA,MD) to drive the registration between two DTI images.
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We are developing a pipeline which performs DTI pair-wise registration. The goal is to create a user-friendly Slicer3 extension which performs such a registration automatically, instead of running Slicer3 modules individually (dtiprocess, BRAINSFit, BRAINSDemonWarp, ResampleDTI Volume...). Such a wrapper will generate and use scalar features (e.g FA,MD) to drive the registration between two DTI images.
  
  
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Our approach is to develop a C++ based Slice3 extension, which writes a BatchMake script, in order to call external modules as threads to perform individual steps of the pipeline.
 
Our approach is to develop a C++ based Slice3 extension, which writes a BatchMake script, in order to call external modules as threads to perform individual steps of the pipeline.
  
Our plan for the project week is to development/enhancement of the module.
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Our plan for the project week is to develop/enhance the module.
  
 
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Revision as of 19:30, 16 June 2011

Home < 2011 Summer Project Week DTI PairWise Registration


Key Investigators

  • UNC: Clement Vachet, Francois Budin, Martin Styner
  • IOWA: Joy Matsui, Mark Scully, Hans Johnson

Objective

We are developing a pipeline which performs DTI pair-wise registration. The goal is to create a user-friendly Slicer3 extension which performs such a registration automatically, instead of running Slicer3 modules individually (dtiprocess, BRAINSFit, BRAINSDemonWarp, ResampleDTI Volume...). Such a wrapper will generate and use scalar features (e.g FA,MD) to drive the registration between two DTI images.


Approach, Plan

Our approach is to develop a C++ based Slice3 extension, which writes a BatchMake script, in order to call external modules as threads to perform individual steps of the pipeline.

Our plan for the project week is to develop/enhance the module.

Progress


Delivery Mechanism

This work will be delivered to the NA-MIC Kit as a (please select the appropriate options by noting YES against them below)

  1. ITK Module
  2. Slicer Module
    1. Built-in
    2. Extension -- commandline YES
    3. Extension -- loadable YES
  3. Other (Please specify)

References