Difference between revisions of "2011 Winter Project Week:FreeWaterElimination"
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<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | To implement | + | To implement free water elimination for diffusion data in Slicer3. |
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<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | Our approach | + | Our approach: |
| + | Modify existing Matlab code to Python and then include as a Slicer module. | ||
| − | Our plan for the project week is | + | Our plan for the project week is: |
| + | 1) Review the matlab code | ||
| + | 2) Determine the input and output for the module | ||
| + | 3) Discuss ways of converting matlab code to python | ||
| + | 4) Convert the code to python | ||
| + | 5) Include in Slicer3. | ||
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==References== | ==References== | ||
| − | * | + | *[http://www.ncbi.nlm.nih.gov/pubmed/19623619 Free water elimination and mapping from diffusion MRI. Pasternak O, Sochen N, Gur Y, Intrator N, Assaf Y. Magn Reson Med. 2009 Sep;62(3):717-30.] |
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Latest revision as of 18:52, 16 December 2010
Home < 2011 Winter Project Week:FreeWaterElimination
Key Investigators
- BWH: Ofer Pasternak, Deminan Wassermann, C-F Westin
Objective
To implement free water elimination for diffusion data in Slicer3.
Approach, Plan
Our approach: Modify existing Matlab code to Python and then include as a Slicer module.
Our plan for the project week is: 1) Review the matlab code 2) Determine the input and output for the module 3) Discuss ways of converting matlab code to python 4) Convert the code to python 5) Include in Slicer3.
Progress
