Difference between revisions of "2012 Winter Project Week:SPIEWorkshop"

From NAMIC Wiki
Jump to: navigation, search
 
(4 intermediate revisions by 2 users not shown)
Line 6: Line 6:
  
 
==Key Investigators==
 
==Key Investigators==
* UNC: Jean-Baptiste Berger, Sonia Pujol, Clement Vachet, Martin Styner
+
* UNC: Jean-Baptiste Berger, Clement Vachet, Martin Styner
 +
* BWH: Sonia Pujol
 
* Utah: Guido Gerig
 
* Utah: Guido Gerig
  
Line 13: Line 14:
  
 
<h3>Objective</h3>
 
<h3>Objective</h3>
Pipeline to perform a quality control on DTI images, correcting motion or cleaning irrelevant fibers.
+
This pipeline goes from diffusion weighted images to cleaned diffusion tensor images with the possibility to highlights differences intra- or inter-subjects.
 +
We are currently preparing datasets and developing tools in order to test this pipeline. Tutorials will be made to guide users.
 +
 
  
 
</div>
 
</div>
Line 36: Line 39:
  
 
<h3>Progress</h3>
 
<h3>Progress</h3>
 
+
* Gathering data for testing on Linux 64, Mac OS, and Windows 7 with Visual C++ 2008
  
 
</div>
 
</div>
Line 49: Line 52:
  
 
==References==
 
==References==
 +
* [http://wiki.na-mic.org/Wiki/index.php/Projects:AtlasBasedDTIFiberAnalyzerFramework:Atlas Based DTI Fiber Analizer Framework]
 +
* [http://wiki.na-mic.org/Wiki/index.php/SPIE_2012_DTI_Workshop:SPIE 2012 DTI Workshop]

Latest revision as of 15:12, 13 January 2012

Home < 2012 Winter Project Week:SPIEWorkshop


Key Investigators

  • UNC: Jean-Baptiste Berger, Clement Vachet, Martin Styner
  • BWH: Sonia Pujol
  • Utah: Guido Gerig

Objective

This pipeline goes from diffusion weighted images to cleaned diffusion tensor images with the possibility to highlights differences intra- or inter-subjects. We are currently preparing datasets and developing tools in order to test this pipeline. Tutorials will be made to guide users.


Approach, Plan

The pipeline follows those steps :

  • Processing of DWI images to DTI images and visualization through the current Slicer Module
  • DTI registration to Atlas thanks to DTI Reg
  • Tracking on Atlas
  • Cleaning fiber tracks with FiberViewer Light
  • Getting Statistical data with DTIAtlasFiberAnalyzer

Progress

  • Gathering data for testing on Linux 64, Mac OS, and Windows 7 with Visual C++ 2008

Delivery Mechanism


References