Difference between revisions of "2017 Winter Project Week/WhiteMatterAnalysis"

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==Project Description==
 
==Project Description==
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This project is part of the whitematteranalysis software that provides an automated whole brain tractgoraphy registration and segmentation framework. The aim of this project is to integrate a new Slicer module FiberEndpointAnalysis into the whitematteranalysis pipeline.
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* New Slicer CLI module: FiberEndPointFromLabelMap
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Calculate the overlap of fiber tract (endpoint regions) with anatomical parcellation (e.g. freesurfer) or functional region (e.g. fMRI).
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* New script in whitematteranalysis to call the module in the fiber clustering pipeline.
 
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* Documentation about the new module and script.
 
 
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* Release the FiberEndPointFromLabelMap module as part of SandBox in SlicerDMRI.
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* Integrate the module into the whitematteranalysis software.
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* Testing and documentation about the new functionality.
 
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Revision as of 14:18, 9 January 2017

Home < 2017 Winter Project Week < WhiteMatterAnalysis

Key Investigators

  • Fan Zhang, BWH
  • Shun Gong, BWH
  • Isaiah Norton, BWH
  • Ye Wu, BWH
  • Lauren J. O'Donnell, BWH

Project Description

This project is part of the whitematteranalysis software that provides an automated whole brain tractgoraphy registration and segmentation framework. The aim of this project is to integrate a new Slicer module FiberEndpointAnalysis into the whitematteranalysis pipeline.

Objective Approach and Plan Progress and Next Steps

Calculate the overlap of fiber tract (endpoint regions) with anatomical parcellation (e.g. freesurfer) or functional region (e.g. fMRI).

  • Release the FiberEndPointFromLabelMap module as part of SandBox in SlicerDMRI.
  • Integrate the module into the whitematteranalysis software.
  • Testing and documentation about the new functionality.

Background and References

Retrieved from "https://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/WhiteMatterAnalysis&oldid=94581"